Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06872 ATGGAGTTTAACCTTGAAAACCCTCTTGAAAACTTTCATGACCTTCCTAATTCTCAATGTGTTTCTTCCCTTTTCCTCATTGAATCTGACCATATACCTCCACCAAGTTACTTTCAAAGCCTCAAATCAAATGAGTTTGATACCTCACTTAGAACTGATTTCATCTCTTTGATCTCACAGCTGTCATGCAACTTTGATTCCTTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTTCTAGCTAACCAAGGAATTTTGCAGCCAAAACCATGGGCCAACAAACTTGTTGCAGTAACATGTTTTTCACTAGCAGTAAAAATGTTGAAAACAGAATACTCTGCCACTGATGTTCAGGGTCTTCTGAATCATGATGATGGTGGTTTTATTTTTGAGACACAAACAATAAAAAGAATGGAAGCACTTGTGTTAGGAGCATTACAATGGAGAATGCGTTCCATTACTCCATTCTCTTTCATTCCTTACTTCACCAATTTGTTTAGTCTTGATGATATAACATTGAAGGTTCTCAAAGATAGAGCTTCTCAAATTATATTCAAGTCACAAAAAGATGTAAAAGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCCCTTCTTTATGCTTCACATGAATTGTTTCCTTTTCAATATCCAAGCTTCTTGGGAACAATATCCAATTCTTCATATGTAAATAAAGAAAGTGTGATGCAGTGCTATAATGTAATACAAGAGATATATAAGAAAGAGTACGAATCAATGTTTAATGCAAACTCAAGTTCAGGCACACCAGTTAATGTGTTAGACGAGAATTTTCTAAGTTTGGAAAGTGAAAAAACCAATGGAACAAATCTTGATCCAACTGCTATGATACAAGAGAAGCATTTCAAAAGAAGGAAAATTTAA 909 0.3476 MEFNLENPLENFHDLPNSQCVSSLFLIESDHIPPPSYFQSLKSNEFDTSLRTDFISLISQLSCNFDSFVTYLAINYLDRFLANQGILQPKPWANKLVAVTCFSLAVKMLKTEYSATDVQGLLNHDDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNLFSLDDITLKVLKDRASQIIFKSQKDVKVLEFKPSIVAASSLLYASHELFPFQYPSFLGTISNSSYVNKESVMQCYNVIQEIYKKEYESMFNANSSSGTPVNVLDENFLSLESEKTNGTNLDPTAMIQEKHFKRRKI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06872 302 FunFam D6-type cyclin 34 148 - -
Vivi2g06872 302 SMART Cyclin_C_2 154 268 IPR004367 -
Vivi2g06872 302 Gene3D - 23 242 - -
Vivi2g06872 302 Pfam Cyclin, C-terminal domain 154 253 IPR004367 -
Vivi2g06872 302 SUPERFAMILY Cyclin-like 136 249 IPR036915 -
Vivi2g06872 302 PANTHER CYCLINS 30 253 IPR039361 -
Vivi2g06872 302 SMART cyclin_7 52 145 IPR013763 -
Vivi2g06872 302 SMART cyclin_7 158 246 IPR013763 -
Vivi2g06872 302 CDD CYCLIN_AtCycD-like_rpt2 154 244 - -
Vivi2g06872 302 FunFam D6-type cyclin 149 242 - -
Vivi2g06872 302 Pfam Cyclin, N-terminal domain 27 151 IPR006671 -
Vivi2g06872 302 SUPERFAMILY Cyclin-like 19 151 IPR036915 -
Vivi2g06872 302 Gene3D - 34 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06872 Vivi-Chr2 208459172 208461762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06872 1 281 Core Cell Cycle Gene Families AT4G03270 45.763 4.03e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06872 K18812 - gmx:100799951 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06872 2 208459172 208461762 Vivi2g06872 2 208459172 208461762 ECH