Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06871 ATGGAGTTTAACCTTGAAAACCCTCTTGAAAACTTTCATGACCTTCCTAATTCTCAATGTGTTTCTTCCCTTTTCCTCATTGAATCTGACCATATACCTCCACCAAGTTACTTTCAAAGCCTCAAATCAAATGAGTTTGATACCTCACTTAGAACTGATTTCATCTCTTTGATCTCACAGCTGTCATGCAACTTTGATTCCTTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTTCTAGCTAACCAAGGAATTTTGCCAAAACCATGGGCCAACAAACTTGTTGCAGTAACATGTTTTTCACTAGCAGTAAAAATGTTGAAAACAGAATACTCTGCCACTGATGTTCAGGGTCTTCTGAATCATGATGATGGTGGTTTTATTTTTGAGACACAAACAATAAAAAGAATGGAAGCACTTGTGTTAGGAGCATTACAATGGAGAATGCGTTCCATTACTCCATTCTCTTTCATTCCTTACTTCACCAATTTGTTTAGTCTTGATGATATAACATTGAAGGTTCTCAAAGATAGAGCTTCTCAAATTATATTCAAGTCACAAAAAGATGTAAAAGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCCCTTCTTTATGCTTCACATGAATTGTTTCCTTTTCAATATCCAAGCTTCTTGGGAACAATATCCAATTCTTCATATGTAAATAAAGAAAGTGTGATGCAGTGCTATAATGTAATACAAGAGATATATAAGAAAGAGTACGAATCAATGTTTAATGCAAACTCAAGTTCAGGCACACCAGTTAATGTGTTAGACGAGAATTTTCTAAGTTTGGAAAGTGAAAAAACCAATGGAACAAATCTTGATCCAACTGCTATGATACAAGAGAAGCATTTCAAAAGAAGGAAAATTTAA 906 0.3466 MEFNLENPLENFHDLPNSQCVSSLFLIESDHIPPPSYFQSLKSNEFDTSLRTDFISLISQLSCNFDSFVTYLAINYLDRFLANQGILPKPWANKLVAVTCFSLAVKMLKTEYSATDVQGLLNHDDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNLFSLDDITLKVLKDRASQIIFKSQKDVKVLEFKPSIVAASSLLYASHELFPFQYPSFLGTISNSSYVNKESVMQCYNVIQEIYKKEYESMFNANSSSGTPVNVLDENFLSLESEKTNGTNLDPTAMIQEKHFKRRKI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06871 301 SUPERFAMILY Cyclin-like 19 150 IPR036915 -
Vivi2g06871 301 Gene3D - 23 241 - -
Vivi2g06871 301 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Vivi2g06871 301 PANTHER CYCLINS 30 252 IPR039361 -
Vivi2g06871 301 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
Vivi2g06871 301 SMART Cyclin_C_2 153 267 IPR004367 -
Vivi2g06871 301 CDD CYCLIN_AtCycD-like_rpt2 153 243 - -
Vivi2g06871 301 Gene3D - 34 151 - -
Vivi2g06871 301 FunFam D6-type cyclin 148 241 - -
Vivi2g06871 301 FunFam D6-type cyclin 34 147 - -
Vivi2g06871 301 SMART cyclin_7 52 144 IPR013763 -
Vivi2g06871 301 SMART cyclin_7 157 245 IPR013763 -
Vivi2g06871 301 SUPERFAMILY Cyclin-like 135 248 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06871 Vivi-Chr2 208459169 208461762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06871 1 280 Core Cell Cycle Gene Families AT4G03270 45.918 1.11e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06871 K18812 - gmx:100799951 442.58