Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06858 ATGTTCAATATGATGAAACCATGGCTCTGGCTTTCTCTTCTTAACCTCTTCTTCTCATTACACTTATATCCTTCTCTTGCAGCTTTGACAACAATCTCAACAAACCAATCTCTCTTTGGTGACCATACTCTTATCTCTAAAGGAGGAATCTTTGAATTGGGTTTCTTCAAACCAGGTAATTCCTCTAACTACTACATAGGCATATGGTATAAAAACATCCCTTTAAAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCTGACAAAAACACTGCCACCTTAAAAATCTCAGCTGGTAATTTAGTTCTATTAGACCAATCTTCAAAACAAGTTTGGTCAACAAACATGAGTTTTCCTAAGTCAGATTCTGTTTCAGCTATTCTCTTAGATACTGGAAATCTTGTTTTGAGAAATAGGCCTAATGATGATGATGCATTAGATCCTCTATGGCAGAGTTTTGATTATCAAACAGATACGTTTCTTCCGGGTGGAAAAATTAAGCTGGACAAGATAACAAAGAAGTCTCAGTTTCTGACTTCATGGAAGAATAGGGAAGATCCTTCAACGGGTCTTTTCTCTTTGGAACTTGACCCTGAAGAAACAGATTCATATCTTATTGTTTGGAATAAATCTAAAGAGTATTGGACAAGTGGAACTTGGAATGGAAATATTTTTAGTCTTGTTCCAGAGATGAGATTAAATTACATCTACAATTTTTCATTCGTGTCGAACGAGAATGAGAGCTATTTCACTTACTCATTGTATTCCGATTCAATTATATCTCGGCTTGTGATGGATATCTCGGGCCAGATCAAGCAATATACGTGGATGGAAAGTTTGAATCAGTGGAACCTGTTTTGGTCGAAGCCAAGACAACAATGTGCGGTTTATTCTTTGTGCGGTGCATTTGGGATCTGCACTGAAAACTCTAAGCCGTATTGTACTTGTTTGAGAGGTTTTGAGCCCAAGTCAGTGTCTGATTGGAATATGGAGGATCACTCAAGTGGGTGTATCAGAAGAACAAGTTTGCAATGCAAGGGTTCCTATCCCTCTTATAGGGATAATTACGCGTTCCTTGCAATGACCAACATGGCATTACCTAAACATGCACAATCTGTGGGGTTAGGGAATGCAGAAGAATGTGAATTTACTTGCTTGAGAAACTGCTCCTGCACTGCTTATACATATGATAGTAATGGGTGTTCAATTTGGTTTGGAGAACTCATGAATCTACAACAATTGACTTCTGATGATAGTAGTGGACAAACTTTATTTATCAAACTTGCAGCATCAGAATTTCATGATGCTAGTGAAAACAGATATCGAGGGAGGGTGACTATTGGTGCTGCTGTGGGTGCGGTTGTTGGCATAGGGATACTCTTATCCCTTCTATTGTTTTTCATACTTAGGCGAAGAAAGAGAATGCTTGCTAATGGAAATCTTTTGGACGGTTTTATGGTGGAATTTGAGTACAAGGATTTGCAAAATGCCACGAAGAACTTCTCGGAGAAATTGGGAGGAGAAGGAGGTTTTGGTTCGGTTTTCAAAGGAACTTTAGCTGATTCAAGTGTGGTAGCAGTAAAGAAGCTAGAGGGTGTTAGCAAAGGAGAGAAGAAGTTCAGAACAAAAGTGAGTATAATAGGTACAATGCAGCATGTTAATCTTGTCTGGCTTCGTGGATTCTGTTCGGAAAGTACAACCAAAAGGTTCCTGGTTTATGATTACATGCCAAATCTTTCCTTGGATTTCAAGTTATTTGGAAACAACAATTCTGAGGTGTTGGGATGGAAAATGAGATACCAAATAGCTCTTGGAATTGCAAGGGGACTAATTTACCTACATGAGAAATGCGAAAAATGTATCATACACGGAGATATAAAGCCGGAAAACATTCTCCTTGACGCTGATTTTTGTCCAAAACTTTCCGACTTCGGCCTATCTAAGCTAATCGGACGGGATTTCAGCAGAATCCTTACAACCATGAGAGGAACAAGAGGTTATCTAGCCCCAGAATTGTTATCTAGAACTGCTATCACTGCCAAAGTCGATGTTTACAGCTACGGAATGATGCTTTTTGAGGTTGTATCAGGTAGGAGGAACTCCGATCTATCTCAAGATGGCGAAGTTATTTTCTTTCCTACCTTGGCTGCAAAAGTAGTTAACGAAGGTGGCAGTGTGATCACTCTTTTGGACCCTAGGTTGGAGGGAAATGCTGAGATTGAAGAGGTTACTCAAATGATAATAGTTGCTTCTTGGTGTGTTCAAGAAAATGAAACTCAGAGGCCAACGATGCGTCAGGTACTTCAAATTCTTGAGGGGATCTTGGATGTGAATGTGCCACCAATTCCAAGATTCAATCAAGTGTTTGTAGATAACTAA 2385 0.3929 MFNMMKPWLWLSLLNLFFSLHLYPSLAALTTISTNQSLFGDHTLISKGGIFELGFFKPGNSSNYYIGIWYKNIPLKTIVWVANRDNPVSDKNTATLKISAGNLVLLDQSSKQVWSTNMSFPKSDSVSAILLDTGNLVLRNRPNDDDALDPLWQSFDYQTDTFLPGGKIKLDKITKKSQFLTSWKNREDPSTGLFSLELDPEETDSYLIVWNKSKEYWTSGTWNGNIFSLVPEMRLNYIYNFSFVSNENESYFTYSLYSDSIISRLVMDISGQIKQYTWMESLNQWNLFWSKPRQQCAVYSLCGAFGICTENSKPYCTCLRGFEPKSVSDWNMEDHSSGCIRRTSLQCKGSYPSYRDNYAFLAMTNMALPKHAQSVGLGNAEECEFTCLRNCSCTAYTYDSNGCSIWFGELMNLQQLTSDDSSGQTLFIKLAASEFHDASENRYRGRVTIGAAVGAVVGIGILLSLLLFFILRRRKRMLANGNLLDGFMVEFEYKDLQNATKNFSEKLGGEGGFGSVFKGTLADSSVVAVKKLEGVSKGEKKFRTKVSIIGTMQHVNLVWLRGFCSESTTKRFLVYDYMPNLSLDFKLFGNNNSEVLGWKMRYQIALGIARGLIYLHEKCEKCIIHGDIKPENILLDADFCPKLSDFGLSKLIGRDFSRILTTMRGTRGYLAPELLSRTAITAKVDVYSYGMMLFEVVSGRRNSDLSQDGEVIFFPTLAAKVVNEGGSVITLLDPRLEGNAEIEEVTQMIIVASWCVQENETQRPTMRQVLQILEGILDVNVPPIPRFNQVFVDN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06858 794 FunFam Serine/threonine-protein kinase 24 155 - -
Vivi2g06858 794 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi2g06858 794 FunFam serine/threonine-protein kinase PBS1-like 471 577 - -
Vivi2g06858 794 SUPERFAMILY Protein kinase-like (PK-like) 487 774 IPR011009 -
Vivi2g06858 794 CDD PAN_AP_plant 343 431 - -
Vivi2g06858 794 ProSiteProfiles Protein kinase domain profile. 502 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06858 794 SMART serkin_6 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06858 794 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Vivi2g06858 794 SMART ntp_6 355 430 IPR003609 -
Vivi2g06858 794 CDD STKc_IRAK 509 776 - -
Vivi2g06858 794 Gene3D Phosphorylase Kinase; domain 1 469 577 - -
Vivi2g06858 794 SMART blect_4 35 158 IPR001480 -
Vivi2g06858 794 CDD B_lectin 35 157 IPR001480 -
Vivi2g06858 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vivi2g06858 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 223 IPR036426 -
Vivi2g06858 794 Pfam PAN-like domain 358 413 IPR003609 -
Vivi2g06858 794 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Vivi2g06858 794 Gene3D - 26 156 IPR036426 -
Vivi2g06858 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Vivi2g06858 794 FunFam S-receptor-like kinase 5 578 782 - -
Vivi2g06858 794 Pfam Protein kinase domain 509 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06858 794 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Vivi2g06858 794 Pfam D-mannose binding lectin 77 184 IPR001480 -
Vivi2g06858 794 PANTHER OS07G0415500 PROTEIN 13 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06858 Vivi-Chr2 208163947 208167195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06858 455 783 Receptor kinase-like Gene Family AT5G20050 41.873 4.53e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi2g06858 Pkinase 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06858 - - psat:127086809 1309.66