Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06856 ATGTTCAATATGAGGAAACCATGGTTCTGTCTTTCTCTTCTTAACCTCTTAGTCTCTTTACACTATCATCCTTCCCTTGCATCTCTAACATCCATCTCTATAAACCAATCTCTCATTGCTGACCAAACTCTTATCTCTAAAGGAGGAACCTTTGAATTAGGTTTCTTCAAACCAAGTAATTCCCCCAAGTACTATATAGGAATATGGTACAAAAAGGTTTCCCAACAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCCAAAAACACTGCAACCTTAAAAATTTCAGCTGGTAATTTAGTTCTATCAGACGAGTCTTCAAACCAAGTTTGGTCAACAAACATGAGTTTTCCTAAGTCAGATTCTGTTTCAGCTATTCTCTTGGATAGTGGAAATCTTGTTTTGAGAAGTAGGCCTAATGATGATGCAGCAGAACCTCTATGGCAGAGTTTTGATCATCCAGCAGATACATGGCTTCCTGGTAGCAAAATTAGGATAGACAATAAAACAAAGAAGCCTCATTATTTCACTTCATGGAAGAATAGGGAAGATCCCGGAACGGGTCTTTTCTCTTTTAAACTAGACCAAAAAGGAACAATTTCATATTTAATTCTTTGGAATAAGTCTGAACAGTACTGGACAAGTGGAGCTTGGAATGGACATATTTTTAGTCAGGTTCCCGAGATGAGGTTGAATTATATCTACAATTTGTCGTTAGTGTCAAACGAGAATGAGAGCTATTTCATTTACTCTGTGTATAAACCTTCCATTATGTCGCGGTTTGTGATGGATATATCCGGGCAGATCAAGCAATTTTCATGGTTGGAAAATATCAAAGAGTGGAACCTGTTTTCAACGCAGCCAAGAGCACAGTGTGAGGTTTATGCCTTCTGCGGTGCGTTTGGAAGCTGTACTGAGAACTCAAAGCCGCATTGTAATTGTTTGAATGGTTTTGAGCCAAAGTCACAGTCTGATTGGGGTCTGGAGGATTACTCAGGTGGGTGTATGAGAAAAACAAGGTTGCAATGTGAGAGTTCTGGTCACTCGAATGGTGTAAAGGACAGGTTCCGTCCAATCCCAAACATGGCAATGCCGACACATGCACAATCTTTGAGATCAGAGAATACGGAAGAATGTGAATCAATATGCTTGAACAACTGCTCTTGTTCTGCTTATTCGTATGACAGTAATGGGTGTTCAGTTTGGATTAAAGATATACTGAATCTGCAACAATTTTCTTCAGATGACGGCAGTGGAAAAACTTTGTATCTAAAACTTGCAGCATCAGAATTTAAGGATGCTAAAAAAAGTAATGGTGTGATTATCGGTATTGTAGTAGGCTCGGTAGTTGGTGTAGGGGTTCTCTTGGCCCTTCTTCTGTTTATCGTGCTTAGGCGAAGAAAGCAAACAGTTGGAACAGGTAGGCTCGTGGAGGGTTCGTTGGTTGCCTTTGGTTACAGAGATATGCAAAATGCAACTAAGAATTTTTCTGAGAGATTGGGAGGAGGAGGATTCGGTTCTGTTTTCAAAGGAACATTGGCTTATTCATGTGTGGTGGCAGTGAAGAAGTTGGAAAGTGTTAGCCAAGGAGAGAAGCAGTTCAGAACAGAAGTGAGCACAATAGGGACAGTGCAACATGTTAACCTTGTTCGGCTTCGTGGATTCTGCTCGGAAGGTACTAAACGGATGCTGGTTTATGATTACATGCCAAATGGTTCCTTGGATTTCCATTTATTCATGAAGAAAGATACTTCTGAGGTTTTGAGCTGGAAAATGAGATACCAAATAGCTCTTGGAATTGCAAGGGGATTAACTTACCTGCATGAAAACTGCCGAGACTGTATCATACACTGCGACGTAAAGCCAGAAAACATTCTCCTAGACCCCGATTTTTGTCCGAAAGTTGCTGACTTTGGCCTAGCTAAGCTAGTTGGGCGAGATTTCAGCAGGGTCCTAACAACCATGAGAGGAACAAGAGGCTATCTTGCGCCAGAATGGATTTTTGGGGTGGCTATTACAGCCAAAGCCGATGTTTACAGCTATGGAATGATGCTTTTCGAGGTTGTTTCAGGTAGGAGAAACTCTGATCCATCAGAAGACGGTCAAGTTACGTTCTTTCCTACCTTAGCTGCAAAAGTAGTTATTGAAGGTGGCAGTGTGATCACCCTTTTGGATCCTAGGTTGGAGGGAAATGGGAATATTGAAGAAGTTGCGCGAATAATAAAAGTCGCTACTTGGTGTGTCCAAGATAATGAAAATAAAAGGCCAACAATGGGTCAGGTAGTTCAAATTCTTGAAGGGATTGTGGAAGTGAACTTGCCCCCGATTCCAAGATCCCTTCAAATCTTGGTTGACAACGATGAGAACATGGTTTTCTACACTGATTCTAGCTCAACTCAAAGTTCACAAGTTAAAGAGTAA 2427 0.41 MFNMRKPWFCLSLLNLLVSLHYHPSLASLTSISINQSLIADQTLISKGGTFELGFFKPSNSPKYYIGIWYKKVSQQTIVWVANRDNPVSKNTATLKISAGNLVLSDESSNQVWSTNMSFPKSDSVSAILLDSGNLVLRSRPNDDAAEPLWQSFDHPADTWLPGSKIRIDNKTKKPHYFTSWKNREDPGTGLFSFKLDQKGTISYLILWNKSEQYWTSGAWNGHIFSQVPEMRLNYIYNLSLVSNENESYFIYSVYKPSIMSRFVMDISGQIKQFSWLENIKEWNLFSTQPRAQCEVYAFCGAFGSCTENSKPHCNCLNGFEPKSQSDWGLEDYSGGCMRKTRLQCESSGHSNGVKDRFRPIPNMAMPTHAQSLRSENTEECESICLNNCSCSAYSYDSNGCSVWIKDILNLQQFSSDDGSGKTLYLKLAASEFKDAKKSNGVIIGIVVGSVVGVGVLLALLLFIVLRRRKQTVGTGRLVEGSLVAFGYRDMQNATKNFSERLGGGGFGSVFKGTLAYSCVVAVKKLESVSQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKRMLVYDYMPNGSLDFHLFMKKDTSEVLSWKMRYQIALGIARGLTYLHENCRDCIIHCDVKPENILLDPDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWIFGVAITAKADVYSYGMMLFEVVSGRRNSDPSEDGQVTFFPTLAAKVVIEGGSVITLLDPRLEGNGNIEEVARIIKVATWCVQDNENKRPTMGQVVQILEGIVEVNLPPIPRSLQILVDNDENMVFYTDSSSTQSSQVKE 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06856 808 CDD STKc_IRAK 502 770 - -
Vivi2g06856 808 Gene3D Phosphorylase Kinase; domain 1 463 570 - -
Vivi2g06856 808 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Vivi2g06856 808 Pfam Protein kinase domain 499 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06856 808 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Vivi2g06856 808 Pfam D-mannose binding lectin 77 182 IPR001480 -
Vivi2g06856 808 Gene3D - 27 153 IPR036426 -
Vivi2g06856 808 SMART ntp_6 353 428 IPR003609 -
Vivi2g06856 808 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Vivi2g06856 808 PANTHER OS07G0415500 PROTEIN 11 779 - -
Vivi2g06856 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 153 - -
Vivi2g06856 808 Pfam PAN-like domain 354 410 IPR003609 -
Vivi2g06856 808 CDD PAN_AP_plant 341 429 - -
Vivi2g06856 808 FunFam Serine/threonine-protein kinase 571 775 - -
Vivi2g06856 808 SUPERFAMILY Protein kinase-like (PK-like) 480 768 IPR011009 -
Vivi2g06856 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 221 IPR036426 -
Vivi2g06856 808 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06856 808 SMART blect_4 35 156 IPR001480 -
Vivi2g06856 808 ProSiteProfiles Protein kinase domain profile. 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06856 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi2g06856 808 Gene3D Transferase(Phosphotransferase) domain 1 571 775 - -
Vivi2g06856 808 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Vivi2g06856 808 PIRSF SRK 2 808 IPR024171 GO:0004674
Vivi2g06856 808 CDD B_lectin 35 156 IPR001480 -
Vivi2g06856 808 FunFam Receptor-like protein kinase 4 464 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06856 Vivi-Chr2 208130706 208133505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06856 452 777 Receptor kinase-like Gene Family AT5G20050 41.944 9.09e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi2g06856 Pkinase 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06856 - - gmx:100782119 1158.28