Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06855 ATGTTCAATATGATGAAACCATGGTTCTGGCTTTCTCTTCTTAGCCTATTCTTGTCTTTACACTTATGTCCTTCTCTTGCAGCTTTGACAACAATCTCAACAGACCAATCTCTCTCTGGTGACCAAACTCTTATCTCTAAAGGAGGAATCTTTGAATTGGGTTTCTTCAAACCAGGTAATACTTCCTCTAATTACTACATAGGAATATGGTACAAAAAGATCAGCCAACAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCTGACAAAAACACTGCCACCTTAAAAATCTCAGATGGTAATTTAGTTCTATTAGACCAATCTTCAAAACAAGTTTGGTCAACAAACATGAGTTTTCCTAAGTCAGATTCTGTTTCAGCTATTCTCTTAGATAGTGGAAATCTTGTTTTGAGAAATAGGCCTAATGATGATGCATCAGATCCTCTATGGCAGAGTTTTGATCATCCTGCAGATACATGGCTTCCTGGTGGAAAAATTAGGCTAGACAATAAAACAAAGAAGCCTCAGTATTTGACTTCATGGAAGAATAAGGAAGATCCTGCAACGGGTCTTTTCTCGTTGGAACTAGACCCGAAAGGAACGAGTTCGTATTTGATTCTTTGGAATAAGTCTGAACAGTATTGGACTAGTGGAGCTTGGAATGGACATATTTTTAGTTTGGTTCCTGAGATGAGGTTGAATTATATCTACAATTTTTCGTTTGTGTCGAACGAGAATGAGAGTTATTTCACTTACTCCGTGTATAACCCTTCCTATATATCGCGGTTTGTGATGGATATCTCCGGGCAGATTAAGCAACTGTCATGGTTGGAAAATATCAAAGAGTGGAACCTATTTTGGTCGCAGCCAAGAGCACAGTGTGAGGTTTATGCTTTCTGCGGTGCGTTTGGAAGCTGTACTGAGAACTCGAAGCCTTATTGTAATTGTTTGAGTGGTTTTGAGCCGAAGTCACAGTCTGATTGGGATCTGGAGGATCACTCAGGTGGGTGTATAAGAAAAACAAGGTTGCAATGTGAGAGTTCAGATAATTCGAAAGGCGTAAAGGACAGGTTCCGTCCAATCCCAAACATGGCATTGCCTAAACATGCACAATCTGTAAGATCAGGGAATGCAGAAGAATGTGAATCAATATGCTTGAACAACTGTTCTTGTTCTGCTTATTCGTATGACAGTAATGGATGTTCAGTTTGGTTTAAAGACCTACTGAGTCTGCAACAACTTTCTACAGATGACAGCAGTGGAAAAACTTTGTTTCTAAAACTTGCAGCATCAGAATTTAAGGATGATAAAAAAGGTAATGGTGTGATTATCGGTATTGCATTAGGTGCGATAGTTGGCGTTGGGATTCTCTTGGCCCTTCTTCTGTTCGTCGTGTTTAGGCGAAGAAAGCGAACTGTTGGAACGGGTAAGCCCGTGGAGGGTTCGTTGGTGGCCTTTGGTTACAGAGATATGCAAAATGCGACTAAGAATTTCTATGAGAAATTGGGAGGAGGCGGATTCGGTTCTGTATTCAAAGGAACATTGGCTGATTCAAGTTTAGTGGCAGTGAAGAAGTTGGAAAGTGTTAGCCAAGGAGAGAAACAGTTCAGAACAGAAGTGAGTACAATAGGAACTGTGCAACATGTTAACCTTGTTCGGCTTCGTGGATTCTGCTCAGAAGGTACTAAACGGATGTTGGTTTATGATTACATGCCAAATGGTTCCTTGGATTTCCATTTATTCATGAAGAAGGATACCTCAGTGCTTTTGAACTGGAAACTGAGATACCAAATAGCTCTTGGAATTGCCAGGGGATTGACTTACCTCCACGAGAAGTGCCGAGACTGTATCATACATTGTGATGTAAAGCCGGAAAACATTCTCTTAGACACAGATTTTTGTCCAAAAGTTGCGGACTTTGGCCTAGCTAAGCTAGTTGGGCGAGATTTCAGCAGGGTCCTAACAACCATGAGAGGAACAAGAGGCTATCTTGCACCAGAGTGGATTTCTGGGGTGGCCATTACAGCCAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTCGAGGTTGTATCAGGTAGGAGGAACTCTGATCCATCGGAAGACGGTCAATTTACTTTCTTTCCTACCTTAGCTGCAAAAGTAGTTATTGAAGGCGGCAGTGTGATCACCCTATTGGATCACAGGTTAGAGGGAAATGGGGACATTGAAGAAGTTGCGCGAATAATAAAAGTCGCTTCTTGGTGTGTCCAAGATAATGAAAATGAAAGGCCAACAATGGGTCAGGTAGTTCAAATTCTTGAAGGGATTTTGGAAGTGAACTTGCCTCCGATTCCAAGATCCCTTCAAATGTTGGTTGATAATCACGAGAACATGGTTTTCTTCACCGATTCTAGCTCAACTCAAAGTTCACAGGTTAAGAGTAACATCTCGACAAGCTCTCAGGTCAAAAGCAATATATCATCGGCCAGCTCTAATTTATCAGCCGAAAATTAG 2502 0.4125 MFNMMKPWFWLSLLSLFLSLHLCPSLAALTTISTDQSLSGDQTLISKGGIFELGFFKPGNTSSNYYIGIWYKKISQQTIVWVANRDNPVSDKNTATLKISDGNLVLLDQSSKQVWSTNMSFPKSDSVSAILLDSGNLVLRNRPNDDASDPLWQSFDHPADTWLPGGKIRLDNKTKKPQYLTSWKNKEDPATGLFSLELDPKGTSSYLILWNKSEQYWTSGAWNGHIFSLVPEMRLNYIYNFSFVSNENESYFTYSVYNPSYISRFVMDISGQIKQLSWLENIKEWNLFWSQPRAQCEVYAFCGAFGSCTENSKPYCNCLSGFEPKSQSDWDLEDHSGGCIRKTRLQCESSDNSKGVKDRFRPIPNMALPKHAQSVRSGNAEECESICLNNCSCSAYSYDSNGCSVWFKDLLSLQQLSTDDSSGKTLFLKLAASEFKDDKKGNGVIIGIALGAIVGVGILLALLLFVVFRRRKRTVGTGKPVEGSLVAFGYRDMQNATKNFYEKLGGGGFGSVFKGTLADSSLVAVKKLESVSQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKRMLVYDYMPNGSLDFHLFMKKDTSVLLNWKLRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILLDTDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEVVSGRRNSDPSEDGQFTFFPTLAAKVVIEGGSVITLLDHRLEGNGDIEEVARIIKVASWCVQDNENERPTMGQVVQILEGILEVNLPPIPRSLQMLVDNHENMVFFTDSSSTQSSQVKSNISTSSQVKSNISSASSNLSAEN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06855 833 Pfam Protein kinase domain 501 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06855 833 Pfam D-mannose binding lectin 78 184 IPR001480 -
Vivi2g06855 833 CDD PAN_AP_plant 343 431 - -
Vivi2g06855 833 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Vivi2g06855 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Vivi2g06855 833 SMART ntp_6 355 430 IPR003609 -
Vivi2g06855 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 223 IPR036426 -
Vivi2g06855 833 CDD STKc_IRAK 504 772 - -
Vivi2g06855 833 FunFam Serine/threonine-protein kinase 573 777 - -
Vivi2g06855 833 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Vivi2g06855 833 Pfam PAN-like domain 356 412 IPR003609 -
Vivi2g06855 833 CDD B_lectin 35 158 IPR001480 -
Vivi2g06855 833 PANTHER OS07G0415500 PROTEIN 13 781 - -
Vivi2g06855 833 MobiDBLite consensus disorder prediction 806 833 - -
Vivi2g06855 833 Gene3D Phosphorylase Kinase; domain 1 466 572 - -
Vivi2g06855 833 FunFam Receptor-like protein kinase 4 466 572 - -
Vivi2g06855 833 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Vivi2g06855 833 FunFam Serine/threonine-protein kinase 24 155 - -
Vivi2g06855 833 SMART serkin_6 498 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06855 833 SUPERFAMILY Hairpin loop containing domain-like 356 413 - -
Vivi2g06855 833 Gene3D - 26 155 IPR036426 -
Vivi2g06855 833 ProSiteProfiles Protein kinase domain profile. 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06855 833 PIRSF SRK 1 822 IPR024171 GO:0004674
Vivi2g06855 833 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Vivi2g06855 833 SMART blect_4 35 158 IPR001480 -
Vivi2g06855 833 SUPERFAMILY Protein kinase-like (PK-like) 484 804 IPR011009 -
Vivi2g06855 833 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06855 Vivi-Chr2 208105812 208108746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06855 450 779 Receptor kinase-like Gene Family AT5G20050 41.758 3.70e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi2g06855 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06855 - - gmx:100782119 1221.84