Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06854 ATGAAGAAAAACTGCGAACTCTGCAAAGCTCCGGCTACAACTTTCTGTGAGTCCGACCAGGCTAGCTTATGCTGGACCTGCGATTCCAAGATCCACAGTGCAAATTTCCTTGTTGCCAGACACGTCAGGACTCTCCTCTGTCACCGGTGCCAGTCTCCCTCGCCGTGGAAAGCCTCCGGTGCTAGGCTTAGTAACGCGCTTTCTTTGTGTGAAACGTGCGGTTGCGGTGGTGGTGGTGGTGGAAGGAAATTGGAAGATGAACAGGGAGAAGAGAGTGAAGGTGACAATGAGGATGACGATGAGGTAGATACTGATTTTGATGAGGAGGAGGATGAGGAAGAGGAGGTTGACGGTGATGAGGATGGTGATAATCAGGTTGTTCCTTGGTCTTCTACGGCGCCGCCGCCGCCGGCTTCGAGTTCTTCCGGTAGCGAAGAGTCGGTTAGTAAGTGTAACGATAACGATGAGGAGGTTGTTTCAAAGTTAGTTACAACAAACTTAATTTCTTTGAAACGACGTCGTGAAGAGGATCGTGATTTTCAGGCTTCAGATTCGAAAAATTATGTAAATCAACGGAGGTACGGTGCTGAGAGGAGGAGAGACGACGGAGAACCGTCGTCGAAAGTGTTGATCCGGCAAGTAATTGACGGAAAAGGCCCGGAGCATTGTCAGCCACACGATTGA 684 0.4985 MKKNCELCKAPATTFCESDQASLCWTCDSKIHSANFLVARHVRTLLCHRCQSPSPWKASGARLSNALSLCETCGCGGGGGGRKLEDEQGEESEGDNEDDDEVDTDFDEEEDEEEEVDGDEDGDNQVVPWSSTAPPPPASSSSGSEESVSKCNDNDEEVVSKLVTTNLISLKRRREEDRDFQASDSKNYVNQRRYGAERRRDDGEPSSKVLIRQVIDGKGPEHCQPHD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06854 227 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 188 - -
Vivi2g06854 227 MobiDBLite consensus disorder prediction 77 156 - -
Vivi2g06854 227 MobiDBLite consensus disorder prediction 90 122 - -
Vivi2g06854 227 MobiDBLite consensus disorder prediction 173 208 - -
Vivi2g06854 227 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Vivi2g06854 227 MobiDBLite consensus disorder prediction 191 207 - -
Vivi2g06854 227 SMART bboxneu5 1 46 IPR000315 GO:0008270
Vivi2g06854 227 CDD Bbox1_BBX-like 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06854 Vivi-Chr2 208069762 208070938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06854 1 138 C2C2-CO-like Transcription Factor Family AT4G27310 41.714 3.20e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi2g06854 zf-B_box 2.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06854 - - mtr:11417549 228.409