Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06851 ATGAAAACCTTTCTTCTGTTTTCCCTTCTTTTCTGGCTGCTATACTTTCCACTATGTTCAGCTAGAGATACTTTGAGCTTTGGCAAGAACATATCTCAAGACAGCTCAGAAAATCTTGTTTCAATTGGCGAAAAATTTCAACTCGGTTTTTTCTCCTTACCAATTGAAAGTGAAGCAAGCACCACAACTCTTAAAAAGTACTTAGGAATATGGTATCAAAATTTGGAGCCACAAACAGTGGTATGGATAGCCAATAGAAACAAGCCTATTGTAGATTCCAATGGAGTTTTTCAAATTTCACAGGATGGAAATCTTGTAGTAGCAGATGCATCACAGAGTTATTGGTCCACAGATTTAGAAGTGTCCTCGTCAAGAAATTATACAGTGAAGCTCTTGGATTCTGGAAACCTAGTGCTAATGGATGATGATCATGGTTATTTGTGGCAGAGCTTTCAACATCCAACGGATACATTTCTTCCCGGTATGAAAATGGACATGAATTTAACATTGAGTTCTTGGAAAAACGAGAGCGATCCAGAAAGTGGAAGCTTCGTCTTTAAGCAGGCTCGAAGAGGGGACTATTCAAATTTTATAGTAAACAACCAGTTACAACTTTACTGGTCATTTGATGGAGACAATTCAGATAAGATGATCCATATCATTCGTTACTTGTTGGAAAACGCGACATCCTATTCATTGTATGGCAAGTTATTAAACAAAACCGTCGAAGGAGATTCTTATTATGATAAATCAAGGCTGTTGATGAATTCTAGTGGGGAGATACAATTTTGGAAGTGGGATGAAAGCATTAATCAATGGTTTAACATGTGGTCGCGGCCTGATGTATGTGACATAAATAACTATTGTGGTAACTTTAGCAGCTGCAACAAAAATAATTTGTTTCCATGTAAGTGTTTACCAGGATTCCGTCCCAGGTTGTCGGGTAATAACTACGTTGGAAAACGCTTTCAAGGGTGTGTTAGAAAATCATCAATGCCGTGTATCAGTTCCACTGCCACAACCAACAATAACATGATGTTCATCAACTTAACCAAGATAAAAGAAGGAAAACCAGACATAACAGTCTTTTCAGAGACCGAAGAAAGTTGTCAATCTCAATGTCTCAACATGTGTCCAACCTCCCCGTGCAACGCTTATTCATATAATTCTTCTTATTCTGATCGTAGTAGTAACTCTATATGCGGGATATGGACACGAGAATTGCCTACGCTTCAAGAGGAGCAAGATGATGGCCACGATTTTTCGATCCTAGTCAAGACCTCAGACATAGAATCAACTGTAAAATCATGTGGACCTTGTGGCACATACATAATTCCTTATCCTCTAAGCACCGGGCCAACATGTGGAGACCCTATGTACAACAAGTTCAATTGTAATTCACTGACAGGCCAGGTCAGTTTCATGATGCAAGATGGAAAATCATATCGAGTTACCTTGATTAAAGAAGTGGATAGAAAGTTTTACATCCAAACGAATGATTCTGATTCAGATCGCTGTGATGAATCCAGTTCCGATAGTTATCAAGATGATAAACCTAGTTCACCATTTAGTGTGACTAGTTGGTGTTACAGGGAAGACGAAATAGAACTCAATTGGGCACCAGCACCGGAACCACTTTGTGATAAGTATTTTGGCTGCAAAAGTTGGACTCATTCCACATGCATTGCAGATAGGTGCCACTGTGATTCAAAATATTCGTGGAACGCTTCAAGTTTAAGCTGTACCAAAGAATCATCAAGAAACCATTCTACCTATCGAATGCGATTGATTATTGGAATAATTTGTATAGTCATCATTATCCTAACATGTATAGGAGTGCTTGCTTATGTAACAAGAAACAAAATAGCCCACAAGTTTGATAAGGTGAGCATTCGAATTCAAGAGAGCTTGTACGACAGTGAAAAACATGTGAAAGATTTGATCGGCTTAGGAAATTTAGAAGAAAATGAAGGTGAAAGCATTGAAGTACCTTATTATACTTTTAGAAGCATTCAAGCCGCTACAAATAATTTTTCAGATTCAAACAAGCTTGGACAAGGAGGTTATGGTCCTGTTTATAAGGTGATTGGTTCAGTTAACTTTACTCTCTCGCAATCAAAATATCGATATTATGCAAAATTTTCTCATGATATTTGGATTGTTTTTATTCAGGGAATATTTCCTGGAGGTCAAGATATTGCTATAAAGAGACTTTCGAGTGTTTCAACTCAAGGCTTGCAAGAATTTAAAAATGAGGTTGTTTTGATTGCAAAACTTCAACATCGAAATCTTGTTAGACTTAGGGGTTATTGCGTTAAAAGAGATGAAAAAATCCTACTATATGAATACATGTCAAACAAGAGCTTGGACTTATTTATATTTGACCGAACACGAACGGTACTTTTGGATTGGAAATTGCGGTTTGATATTATTTTAGGCATCGCTCGAGGGATGCTTTATCTTCATCAGGACTCAAGATTGAGAGTGATTCATAGAGATCTTAAAACAGGTAACATTCTTTTGGATGAGGAGATGAATCCAAAGATATCAGATTTTGGTCTTGCAAAGATATTTGGGGGGAAAGAGACCGAAGCAAGCACGGAAAGAATAGTGGGAACCTATGGATATATGGCACCAGAATATGCTTTGGATGGATTGTTTTCAGTTAAATCCGATGTTTTTAGCTTTGGTATAATCCTACTAGAGATTATCAGTGGTAAAAAGAACACAGGTTTCTATCAGTCGAAAGAAACGGCTGCTAGCCTTTTGAGTTATGCATGGAGATTATGGACAGAGAATAAGCTTCTGGATTTAATGGACATGGCTCTAAGTGAATCTTGTGATCATAATCAATTTGTTAAGTGTGCGCGTGTTGGGCTCTTATGCGTGCAAGATGAACCAGGTGATCGACCTACCATGTCAAATATTTTAACAATGCTCGATAATGAGACTTCAACCATCCCAATTCCAACAAAACCAACATTTTTCATGAGCAAACACCATTCTTGCACTTCTTCTTCTAGCAAATTAGAAATAAGTATGCATTTTGATACCAGTTATCAAGTAGGTCGATAG 3075 0.3759 MKTFLLFSLLFWLLYFPLCSARDTLSFGKNISQDSSENLVSIGEKFQLGFFSLPIESEASTTTLKKYLGIWYQNLEPQTVVWIANRNKPIVDSNGVFQISQDGNLVVADASQSYWSTDLEVSSSRNYTVKLLDSGNLVLMDDDHGYLWQSFQHPTDTFLPGMKMDMNLTLSSWKNESDPESGSFVFKQARRGDYSNFIVNNQLQLYWSFDGDNSDKMIHIIRYLLENATSYSLYGKLLNKTVEGDSYYDKSRLLMNSSGEIQFWKWDESINQWFNMWSRPDVCDINNYCGNFSSCNKNNLFPCKCLPGFRPRLSGNNYVGKRFQGCVRKSSMPCISSTATTNNNMMFINLTKIKEGKPDITVFSETEESCQSQCLNMCPTSPCNAYSYNSSYSDRSSNSICGIWTRELPTLQEEQDDGHDFSILVKTSDIESTVKSCGPCGTYIIPYPLSTGPTCGDPMYNKFNCNSLTGQVSFMMQDGKSYRVTLIKEVDRKFYIQTNDSDSDRCDESSSDSYQDDKPSSPFSVTSWCYREDEIELNWAPAPEPLCDKYFGCKSWTHSTCIADRCHCDSKYSWNASSLSCTKESSRNHSTYRMRLIIGIICIVIIILTCIGVLAYVTRNKIAHKFDKVSIRIQESLYDSEKHVKDLIGLGNLEENEGESIEVPYYTFRSIQAATNNFSDSNKLGQGGYGPVYKVIGSVNFTLSQSKYRYYAKFSHDIWIVFIQGIFPGGQDIAIKRLSSVSTQGLQEFKNEVVLIAKLQHRNLVRLRGYCVKRDEKILLYEYMSNKSLDLFIFDRTRTVLLDWKLRFDIILGIARGMLYLHQDSRLRVIHRDLKTGNILLDEEMNPKISDFGLAKIFGGKETEASTERIVGTYGYMAPEYALDGLFSVKSDVFSFGIILLEIISGKKNTGFYQSKETAASLLSYAWRLWTENKLLDLMDMALSESCDHNQFVKCARVGLLCVQDEPGDRPTMSNILTMLDNETSTIPIPTKPTFFMSKHHSCTSSSSKLEISMHFDTSYQVGR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06851 1024 ProSiteProfiles PAN/Apple domain profile. 334 428 IPR003609 -
Vivi2g06851 1024 CDD B_lectin 35 154 IPR001480 -
Vivi2g06851 1024 Gene3D - 18 152 IPR036426 -
Vivi2g06851 1024 Pfam Protein tyrosine and serine/threonine kinase 731 979 IPR001245 GO:0004672|GO:0006468
Vivi2g06851 1024 FunFam Uncharacterized protein 717 783 - -
Vivi2g06851 1024 Gene3D Phosphorylase Kinase; domain 1 650 783 - -
Vivi2g06851 1024 MobiDBLite consensus disorder prediction 501 522 - -
Vivi2g06851 1024 CDD STKc_IRAK 684 982 - -
Vivi2g06851 1024 Pfam PAN-like domain 342 408 IPR003609 -
Vivi2g06851 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Vivi2g06851 1024 ProSiteProfiles Protein kinase domain profile. 678 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06851 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 784 988 - -
Vivi2g06851 1024 Gene3D Transferase(Phosphotransferase) domain 1 784 988 - -
Vivi2g06851 1024 Pfam D-mannose binding lectin 79 169 IPR001480 -
Vivi2g06851 1024 SMART blect_4 24 154 IPR001480 -
Vivi2g06851 1024 SUPERFAMILY Protein kinase-like (PK-like) 660 1012 IPR011009 -
Vivi2g06851 1024 Pfam S-locus glycoprotein domain 248 312 IPR000858 GO:0048544
Vivi2g06851 1024 SMART ntp_6 342 425 IPR003609 -
Vivi2g06851 1024 FunFam Receptor-like serine/threonine-protein kinase SD1-8 17 151 - -
Vivi2g06851 1024 ProSiteProfiles Bulb-type lectin domain profile. 24 152 IPR001480 -
Vivi2g06851 1024 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 179 IPR036426 -
Vivi2g06851 1024 SMART serkin_6 678 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06851 1024 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 106 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06851 Vivi-Chr2 208028644 208032347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06851 666 1001 Receptor kinase-like Gene Family AT3G45860 53.687 1.38e-117 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06851 PK_Tyr_Ser-Thr 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06851 - - vvo:131653723 2031.14