Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06833 ATGGACCCAAATTCTCAATCCATGTTTTCCGTTAACACCTCCTCCTCCGCCATAGACCCAATGTTCTCCACCTTCAGCCTCCAATCTCTTCTCACTTTCAACCATTCCTTCTTCACTGACAACTTCCACGCCATAACCGACGACCCTCATCAACTCCCTAGCCTCCCTCAATCTGTCACCGACCAAACTCCTTACCTTAACAACAACAAAAATGTCCTCATAGTCCCAAAAACCGAACACCCTCTTAATCTTCCTCCGTTACAAGAATATCTCCCACTTCAACAACAACCCTTCAACTTCCTCCCCCAATACTATCCACCTTTCGAAACTTTCCACCGTCTTCCTCAACTCCATTCCTCTGAACACTCTAACAGAAAACGCCTCCGTCACCCTTTCACGGAGGAAACAACTCCACCATCACCACCACCACAGAAACAACCTCACTTTGCCCGTGGAAAATCTCCTTCCTTGATTCCTCAGAGCAAGTTAGCAAGACAGAGAAGACAAACACTAAGCGAGAAAACACGCTGCTTGCAGAAACTAATGCCATGGGATAAGAAAATGGATCAAGCTACCCTTTTCGAAGAGGCTTACAAATATGTTAAGTTTTTGCAGGCTCAGATCTCTGCCCTTCGTTCAATGCCTTCTCAGTCAACCACCAACACCACCTACCGCAGCGGCGACGATGATGGTGTTTTTGGTGAGTTGAAGAAGCTGAACAGAAACCAGGCTTTACAGGTAGTGGTGAACTCACCGGTTGCACAAACAAAGCTTTATTCACAAGGCTACTGTGTTTTCTCCATGGAACAAATCTGTCTGCTCAGAAAAATATCAGAGAGAAGACAACAGCAGCAGCAGCTGAATATCTCTGAAAATGCTTCTTCTTCCAAGACTTTCTTTCACTAA 906 0.4547 MDPNSQSMFSVNTSSSAIDPMFSTFSLQSLLTFNHSFFTDNFHAITDDPHQLPSLPQSVTDQTPYLNNNKNVLIVPKTEHPLNLPPLQEYLPLQQQPFNFLPQYYPPFETFHRLPQLHSSEHSNRKRLRHPFTEETTPPSPPPQKQPHFARGKSPSLIPQSKLARQRRQTLSEKTRCLQKLMPWDKKMDQATLFEEAYKYVKFLQAQISALRSMPSQSTTNTTYRSGDDDGVFGELKKLNRNQALQVVVNSPVAQTKLYSQGYCVFSMEQICLLRKISERRQQQQQLNISENASSSKTFFH 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06833 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Vivi2g06833 301 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 137 276 IPR045843 GO:0003700|GO:0006355
Vivi2g06833 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 217 IPR036638 GO:0046983
Vivi2g06833 301 Gene3D - 159 224 IPR036638 GO:0046983
Vivi2g06833 301 MobiDBLite consensus disorder prediction 130 169 - -
Vivi2g06833 301 SMART finulus 161 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06833 Vivi-Chr2 207600032 207600937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06833 167 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 48.214 2.70e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06833 - - vvo:131635828 449.129