Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06831 ATGACAAAACCTGGTTATGTTGTTGTTTATGTCTTTCTTGTTTGCGCTATGACCAAAGGGGGTTCAGAGGGAAAGAGATGGAAACATAATGATTTTCATGCCGATCATGCTGGAGAAAAGGCAGAGCAGGTGTGGAGACATTGTAGAAAAGAAACGATAGAGAGGAGTTATGGTATCAAAGAATTTGAATTGCGTTTATTAGATGAGACGAGGAGAAAGAGATCGAAATATCTACCTCCCTATATGAAACAACACTTTTTGGATTGCTTAAGAAACAGAAACTATCCTATTCCTGTTTCGGAAGAGGAGGGGTATTTGTTGAAGAAGCATTATGAATCACTCTTTGGTTTAGCAGATCGACGTAGATATTTACTTTCAGAGTTACCGCATAATCAGACACCACCGAGTCCTGATTCTGTTCCATCATCCGGATCATCACCAAAACTGAAAAATCATGTTGCAGCACAAACTACTTCTTCACCTCCAACTCCTGAGTTTCCGTATCATGATTTTACACTCCCTCCGAACGTGTTTGTGCCATTTTTACCATCACCTCCACCACCACCACTTCCACCTCGTTCTCTTCCTCCTCCTTCTCCTCTTGCCAATTTTGATCAGAAGGAAATTATTATTGCTGCAGTTGCATCAGGAATTATATTCTTAATAGGCTTGTTCTTATGCATCCGCGAGGTGAGGAAGAGGAAAAAAGTTGACAAAGATGTCAGGCCTTTACTCGTATTAAGCTCAAGTGAGATGTCTGGTGGTAGTTCACAACAGTCCATAAGTTTCGAAAGTAATGATATGAAAGAATATGGTATTAACTACGGAATGAATCCTTCTACTGTTACGAATTTGTCCATTAAGCAAGAAGGCAACAATGCCTCACTGGCTGAGATAACATCATCAGATGACAAAGGACAAGTACCAGTATCTCCATTAAAACATCTTCCAGGAAGATCAGACCCCGAGGCTTCACCGCCGCCGCCTCCACTACCCGCTCTTGCACCTCGCCCTCCACCTCCTCCAAAAACGGCTCGGGCTCCACCTGCTCCTCCCAAACCATTGGAAGGTCGAAACCTTAAATCACCTCTAGGACCACTTCGTACTAAGGATGATGAAGAGTCTGATACTCCAAAACCGAAATTAAAGCCATTTTTCTGGGATAAGGTTGTAGCAAATCCTGATCAAGCCATGGTCTGGCATGAGATCAGATCAGGGTCATTCCAGTTCAGCGAAGAAAAGATAGAGTCTTTATTTGGCTGTGCCAACCAGAACAGAAATGAAAGAAAAAAAAATTCGCCATCTTTAGAACCTTCTGTCCAGTACATTCAGATTATTGAACCCAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGAGCACAAAAGAAGTTATTGGCGCCCTTAAAGAAGGTAATGAGATTCCTGTTGAGCTCATCCAAACATTATTGAAGATGGCTCCAACAACAGATGAGGAATTGAAGCTAAGATTATTCACGGGTGATGTTTCTCGACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTGGCTTTCAAACGTCTTGAGTCACTACTATTCATGTTTACACTTCCGGAAGAGGCTTCAAGCATTAAGGAATGCTTTAAAATATTAGAGGTTTCTTGCAACAAACTAAGGAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACTGGAAACCGGTTGAACAATGGAACTTATCGTGGTGGTGCTCAAGCATTTAGGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGTAAGACCACACTGTTACACTTTGTGGTTCATGAGATTATTCGTACAGAGGGCATAAGAGCTGTAAGAACAGAAAAAGCAAGCCAAAGCCATTCTAGTATGAAAACCGATGATTTCGTCGATGAATCAAATAGGGAATCAGAAGAGCACTATCGCGACCTTGGCCTTCGAGTTGTTTCAGGTCTAATCACTGAACTAGAAGATGTGAAAAAGGCCGCAGTGATAGATGGTGATGCTCTAACATCTGCAGTGTTGAAACTTTATAATACATTGGTAAAATCTGAAGAACTATTGTATACGGATCTGAAGAATCTAGAAGAAGATAGCGAGTTTCAACATTCCCTTGCAAATTTTGTGGAGAAGGCAAGAGAGGACGTGGTATGGTTGATAGGGGAAGAGAAGAAGATAACGACCGGGGTTAAGAGTACTGCAGATTATTTTCATGGGAATGCAGGAAAAGATGAAGGGCTGCGCTTGTTTGTGATTGTACGTGATTTCTTGGTAATGTTGGACAAGGTGTGCAAAGAGGTACAAGCATCGACAACGAAGACATTAGCTCCCAAAGGTTCACCTTCTAGCAAGAAAGAGACTCCTTCATCCTCTCCAGATAAACGTCAACAATCACTCTCTGATATGCATAGGAGACTATTTCCAGCCATAGCAGAGAGGAGAATACATGACTCTAGTTCCTCATCATCATCATCATCATCCTCCGATGATGATGATGATAAGATGTTACCAACGTAG 2565 0.4168 MTKPGYVVVYVFLVCAMTKGGSEGKRWKHNDFHADHAGEKAEQVWRHCRKETIERSYGIKEFELRLLDETRRKRSKYLPPYMKQHFLDCLRNRNYPIPVSEEEGYLLKKHYESLFGLADRRRYLLSELPHNQTPPSPDSVPSSGSSPKLKNHVAAQTTSSPPTPEFPYHDFTLPPNVFVPFLPSPPPPPLPPRSLPPPSPLANFDQKEIIIAAVASGIIFLIGLFLCIREVRKRKKVDKDVRPLLVLSSSEMSGGSSQQSISFESNDMKEYGINYGMNPSTVTNLSIKQEGNNASLAEITSSDDKGQVPVSPLKHLPGRSDPEASPPPPPLPALAPRPPPPPKTARAPPAPPKPLEGRNLKSPLGPLRTKDDEESDTPKPKLKPFFWDKVVANPDQAMVWHEIRSGSFQFSEEKIESLFGCANQNRNERKKNSPSLEPSVQYIQIIEPKKAQNLSILLRALNVSTKEVIGALKEGNEIPVELIQTLLKMAPTTDEELKLRLFTGDVSRLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFKILEVSCNKLRKSRLFQKLLEAVLKTGNRLNNGTYRGGAQAFRLDTLLKLADVKGTDGKTTLLHFVVHEIIRTEGIRAVRTEKASQSHSSMKTDDFVDESNRESEEHYRDLGLRVVSGLITELEDVKKAAVIDGDALTSAVLKLYNTLVKSEELLYTDLKNLEEDSEFQHSLANFVEKAREDVVWLIGEEKKITTGVKSTADYFHGNAGKDEGLRLFVIVRDFLVMLDKVCKEVQASTTKTLAPKGSPSSKKETPSSSPDKRQQSLSDMHRRLFPAIAERRIHDSSSSSSSSSSSDDDDDKMLPT 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06831 854 MobiDBLite consensus disorder prediction 321 356 - -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 787 854 - -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 787 812 - -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 365 382 - -
Vivi2g06831 854 Pfam Formin Homology 2 Domain 374 776 IPR015425 -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 128 166 - -
Vivi2g06831 854 SUPERFAMILY Formin homology 2 domain (FH2 domain) 385 786 - -
Vivi2g06831 854 PANTHER FORMIN-RELATED 209 837 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi2g06831 854 MobiDBLite consensus disorder prediction 129 165 - -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 298 382 - -
Vivi2g06831 854 SMART it6_source 372 791 IPR015425 -
Vivi2g06831 854 MobiDBLite consensus disorder prediction 813 828 - -
Vivi2g06831 854 ProSiteProfiles Formin homology-2 (FH2) domain profile. 372 802 IPR015425 -
Vivi2g06831 854 Gene3D Formin, FH2 domain 378 815 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06831 Vivi-Chr2 207576753 207581991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06831 308 831 FH2 protein (formin) Gene Family AT5G54650 54.513 5.49e-176 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06831 - - qsa:O6P43_000616 784.252