Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06786 ATGGAACCCGTTTGCCCTATCACCTCGTCCCGCGCCACTGAAATATCTGCTCTCCTATCTCCTTCCTCACCTCGCCAACTTCAGGATTATTATCATAGCATTTTCTCTGCAAGACACTGCACTGGCATCACCGTCAAACATGATGACAAATTCGGAAAAGGTGTGTATGCGGCAATGGATTTCAAAGAGGATGAACTTGTTCTGAAAGACCAAATGCTTGTAGGGACACAACACTCCTTCAACAAGATTGATTGTTTTGTGTGTAGCTTCTGCTTTCGTTTTATTGGTTCTATAGAAACTCAAATTGGGAGGAGGCTTTACTTGAGAGAATTAAGGGCCAATAAGAGTCATGCTTGTGATGTAGGAACCTCTTCAAAGTCTATTGAAAACTGTCATGAAATGGATTCGTCTGATGACGAAGAGAGCACTTTGCAACATTGTTCGGGTAGTTTCAAAACTATAGTTCCTCTCCCTGAAGGGGTTGTGGAATCACTGATGAATGGTCAATTGAGATTGCCTTGCTCTGAGAAGTTCTCCTTGCCTCCATCTGTTCCATGCCCTGGTGGATGTGGAGAAGCTTACTACTGCAGCATGTTGTGTGCAGAGTCTGATTGGGAATCCTCCCATTCTTTACTCTGTACTGGTGAGAGTTCTGATCCAAGGCGTAGAGAGGCACTCCTTAAATTCGTGAAACATGCTAATGAAACAAATGACATATTCCTCCTTGCTGCAAAGGCCATTTCATCTACCATATTAAGGTATCACAAGCTAAAAGCAAATTGTCGCAAGGAGAAGCTGAAATATGATGAATCCTGTGTTTCAGACAACTATAATTTCTCTCTTCTTTTGGAAGCGTGGAGACCTATATCAATGGGATACAAAAAGAGGTGGTGGGATTGCATTGCATTACCAGATGACATTGATTCTTCCGATGAGACGTCATTCAGAATGCAAATAAAAGAGTTGGCATATGAGTCTCTCCAACTTCTTGAAACGGCAATATTTGACAAGGAATGCGAGCCATTATTCTCCCTGGAAATCTATGGACATATCATTGGAATGTTTGAACTGAATAATCTTGATTTGGTTGTTGCATCTCCTGTGGAGGATTACTTTTTATACATTGATGAAATGACAAACCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTAGATGCTCTAGGTGAAGACTATTCTACTTGTTGCGAAGGAACTGCATTTTTTCCCTTGCAAAGCTGTATGAACCATTCCTGTTGTCCTAATGCCAAAGCTTTCAAAAGAGATGAGGATAGAGACGGCCAAGCAACAATAATTGCACTGAGGTCCATCTGCAAAGGAGAAGAGATAACCATTTCATATGTTGATGAAGACCTTCCATTTGAAGAGAGACAAGCATCCCTTGCAGATTACGGTTTTAGATGTAAATGTCCAAAGTGCATTGAAGAAGAGCCATAA 1464 0.4119 MEPVCPITSSRATEISALLSPSSPRQLQDYYHSIFSARHCTGITVKHDDKFGKGVYAAMDFKEDELVLKDQMLVGTQHSFNKIDCFVCSFCFRFIGSIETQIGRRLYLRELRANKSHACDVGTSSKSIENCHEMDSSDDEESTLQHCSGSFKTIVPLPEGVVESLMNGQLRLPCSEKFSLPPSVPCPGGCGEAYYCSMLCAESDWESSHSLLCTGESSDPRRREALLKFVKHANETNDIFLLAAKAISSTILRYHKLKANCRKEKLKYDESCVSDNYNFSLLLEAWRPISMGYKKRWWDCIALPDDIDSSDETSFRMQIKELAYESLQLLETAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDEMTNPDKEEAEKITQPILDALGEDYSTCCEGTAFFPLQSCMNHSCCPNAKAFKRDEDRDGQATIIALRSICKGEEITISYVDEDLPFEERQASLADYGFRCKCPKCIEEEP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06786 487 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 486 IPR044237 GO:0008168
Vivi2g06786 487 SUPERFAMILY HIT/MYND zinc finger-like 174 214 - -
Vivi2g06786 487 Gene3D SET domain 374 486 IPR046341 -
Vivi2g06786 487 SUPERFAMILY SET domain 41 480 IPR046341 -
Vivi2g06786 487 ProSiteProfiles SET domain profile. 325 457 IPR001214 GO:0005515
Vivi2g06786 487 CDD SET_SMYD 396 482 - -
Vivi2g06786 487 Pfam SET domain 52 456 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06786 Vivi-Chr2 206927196 206932844 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g06786 SET 5.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06786 - - gmx:100803651 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06786 2 206927196 206932844 Vivi2g06786 2 206927196 206932844 ECH