Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06768 ATGGCTGATGATGATCAATTTCATCATTCAAGTGGAAACTGGTGGGAATCAGCTTCAAGAAACATGAGATTTGATCAAAGTGGTGGAACATCACAACAATCTTCTTCTTCTGCCATCACCAACAATAATATTGTTGATTTTGGTTGGCAAAATTCAGATATGGTTGAGATTAAACCAAGATCTTCCTTGGATAATTCTTCTGTGGTTTTTCATGATACTCGGAAACTCGAACAAAATCAAGATTCTTCGAATTCTACTGACCCCAACTTGCATATGATGGGTTTGGGACTTTCTTCTCATTCCATGGAGTGGAATCAACCATCTTTGATAAGAGGTGATGAAAAGGGAACAGAAAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTCGAGCAAGAAAATGTTATGGGAATGTGTCAACAAGTGAATAGAAATTTTTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGTTCTGGAGATAGCAATGTTATTCAGATGGATTCTTCAGCTTTATATGGAACTCCATCAATTTTACAAGGCTCATCTATGAATAGTTTTCCATATGCAACAAATAACTATGGGTTATTGAACTCTAATAATGAGTTGAATATGAACATGCCTTGTAATAATTGGTCTAATAATAAAGTTCCTCAGTTTTTGATGAGAACTTCACCTCCAAAACAATCATCAACAAATAACCAGTTGCATTTTACTAATAACACCCCCTTTTGGAATGCTTCTGAGGCTCCTAATTCTAAGGATGTTAGGTCAAGTTTCTTCCCCTCTTTGCAACCTCAATTCTCCACACCAAATTTTGATTCACACTCAAAGAATATAAGTGAAGTGAATACTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACTCGTAACGAAACTCCATCAACTTTGCCAGCTTTTAAGGTCAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATATATCAAATTTCTTCATGAACAGGTCACACTTTTGAGCACTCCATATATGAAAAGTGGAGCTTCATCAGAGATTCAACAGAATTCGGGAAAATCAAAAAAATCCGATGGCACGAAGCAAGATCTAAGAAGTCGAGGTCTATGTTTGGTACCGATTTCAAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGAACATCAAGATAA 1284 0.3707 MADDDQFHHSSGNWWESASRNMRFDQSGGTSQQSSSSAITNNNIVDFGWQNSDMVEIKPRSSLDNSSVVFHDTRKLEQNQDSSNSTDPNLHMMGLGLSSHSMEWNQPSLIRGDEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNFSLDQNQFSPQYSSGDSNVIQMDSSALYGTPSILQGSSMNSFPYATNNYGLLNSNNELNMNMPCNNWSNNKVPQFLMRTSPPKQSSTNNQLHFTNNTPFWNASEAPNSKDVRSSFFPSLQPQFSTPNFDSHSKNISEVNTVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTLLSTPYMKSGASSEIQQNSGKSKKSDGTKQDLRSRGLCLVPISSTFPVTHETTVDFWTPTFGGTSR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06768 427 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 140 408 - -
Vivi2g06768 427 FunFam Transcription factor bHLH123 family 317 379 - -
Vivi2g06768 427 Gene3D - 317 380 IPR036638 GO:0046983
Vivi2g06768 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Vivi2g06768 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 369 IPR036638 GO:0046983
Vivi2g06768 427 CDD bHLH_AtbHLH_like 313 364 IPR045239 -
Vivi2g06768 427 SMART finulus 318 362 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06768 Vivi-Chr2 206274554 206278346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06768 242 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.616 6.15e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06768 - - gmx:100778697 549.666