Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06767 ATGGCTGATGATGATCAATTTCATCATTCAAGTGGAAACTGGTGGGAATCAGCTTCAAGAAACATGAGATTTGATCAAAGTGGTGGAACATCACAACAATCTTCTTCTTCTGCCATCACCAACAATAATATTGTTGATTTTGGTTGGCAAAATTCAGATATGGTTGAGATTAAACCAAGATCTTCCTTGGATAATTCTTCTGTGGTTTTTCATGATACTCGGAAACTCGAACAAAATCAAGATTCTTCGAATTCTACTGACCCCAACTTGCATATGATGGGTTTGGGACTTTCTTCTCATTCCATGGAGTGGAATCAACCATCTTTGATAAGAGGTGATGAAAAGGGAACAGAAAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTCGAGCAAGAAAATGTTATGGGAATGTGTCAACAAGTGAATAGAAATTTTTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGTTCTGGAGATAGCAATGTTATTCAGATGGATTCTTCAGCTTTATATGGAACTCCATCAATTTTACAAGGCTCATCTATGAATAGTTTTCCATATGCAACAAATAACTATGGGTTATTGAACTCTAATAATGAGTTGAATATGAACATGCCTTGTAATAATTGGTCTAATAATAAAGTTCCTCAGTTTTTGATGAGAACTTCACCTCCAAAACAATCATCAACAAATAACCAGTTGCATTTTACTAATAACACCCCCTTTTGGAATGCTTCTGAGGCTCCTAATTCTAAGGATGTTAGGTCAAGTTTCTTCCCCTCTTTGCAACCTCAATTCTCCACACCAAATTTTGATTCACACTCAAAGAATATAAGTGAAGTGAATACTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACTCGTAACGAAACTCCATCAACTTTGCCAGCTTTTAAGGTCAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATATATCAAATTTCTTCATGAACAGCTTTTGAGCACTCCATATATGAAAAGTGGAGCTTCATCAGAGATTCAACAGAATTCGGGAAAATCAAAAAAATCCGATGGCACGAAGCAAGATCTAAGAAGTCGAGGTCTATGTTTGGTACCGATTTCAAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGAACATCAAGATAA 1278 0.3701 MADDDQFHHSSGNWWESASRNMRFDQSGGTSQQSSSSAITNNNIVDFGWQNSDMVEIKPRSSLDNSSVVFHDTRKLEQNQDSSNSTDPNLHMMGLGLSSHSMEWNQPSLIRGDEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNFSLDQNQFSPQYSSGDSNVIQMDSSALYGTPSILQGSSMNSFPYATNNYGLLNSNNELNMNMPCNNWSNNKVPQFLMRTSPPKQSSTNNQLHFTNNTPFWNASEAPNSKDVRSSFFPSLQPQFSTPNFDSHSKNISEVNTVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQLLSTPYMKSGASSEIQQNSGKSKKSDGTKQDLRSRGLCLVPISSTFPVTHETTVDFWTPTFGGTSR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06767 425 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 140 406 - -
Vivi2g06767 425 CDD bHLH_AtbHLH_like 313 360 IPR045239 -
Vivi2g06767 425 Gene3D - 317 363 IPR036638 GO:0046983
Vivi2g06767 425 SMART finulus 318 362 IPR011598 GO:0046983
Vivi2g06767 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Vivi2g06767 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 365 IPR036638 GO:0046983
Vivi2g06767 425 FunFam Transcription factor bHLH123 family 317 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06767 Vivi-Chr2 206274552 206278347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06767 242 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.111 2.09e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06767 - - gmx:100778697 541.962