Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06755 ATGAGGATACGTTCCATGCTGCAGGCAGAGATTCTATGTATCATTTGCATGGAAGATTTGATTCATGTTACGAAAGATATTGGAGATCTTGGCTTATGCCTACCAAAGGAATCACATAGTAGAACCAATGAACTTACCTCAGAATCCAGATCAACAACAAGAGAAAACATCCAAAATTTGATTAGTACTTGCAATCCACAGTTGAAGGAAAACTTTCTTAACTGTTTGAGAAAACACCACGTTCCATTCCAAGATCAATCCAAGAATTTGAACACTGCTTACGAGGAATCAGGTTCGTCCAGAAGATATCCGCGTCGAGTTTCGCCTCGATACTTAGCAGAAAAACAAGACAAAGATGGTGGCAACGATGGATCATCTAAAAAAGATAAAAGCGATAATGATTCTGATAAATCATCAAAGAAGAAGTCGAAATCTTCTGAATCTAAACGTAAACAGCACGAGAAAGCGGTTTATAATGCTGTGGCTATGACTGCACTGGTGACATTTATATTTGCAGCATGTATCTTTTTATGTTGTTGTAGGTGTTGTGGAAGTGGTAGAGTTAATCAAACCGATGAAAGGCCGCTTCTCAGCATGAGCAGGAGTGACTACTCTGTTGATTCTTCTCCAAATAATAACCCCTCAAGATTTTCATTAAAAGAGGAGAAACATGGAGTCCAACCAATTAGTAGTATTTTGGTTGATGAGAAAAAGAACTCAATGAAAGAAGATGCTACAAGACCGTCATTTGACCTTAAACCTCCACCGGGTAGGGTAGGAAGTGGCATTCCACCTTTGAAACCTCCTCCAGGAAGACCTGATCCTCTTCCACCCGAACCACCGTCAGTTAAGAATTTTGATTATGCAGTTAATCCACCGCCGCCACCTCCTCCCCCTGGACTACAAATTCCTAGCAGTGTTGGTCCTCTTCCTCCCGGACTACCGAGGCCTGGCGGTGGTGGCCCTCCTCCACCCCCACCGCCGAAACTTGGCAATAGTGGTCCTAAGCCTCCTCCACCACCACCACCACGTGGAAAAGCAGGTGGTCCTCGACCACCACCACCTCCTAAGGGTGGTGTAGGTCCTCCGAGAGCTCCACCTCCATTTGGCCAAAAAGGTACAAGACCTTTACCTAATGGACCAAAGGTTCAAGGGAAAGTTGAAGTTAGTTCAGAAGGTGAAGGTGAAGGTGAAGCTGATGATGCTCCTAAAACCAAGTTAAAGCCTTTTTTCTGGGACAAGGTTCAAGCCAACTCAGATCAAACTATGGTTTGGACTCAACTCAAAGCAGGATCATTCCAGTTTAACGAAGAAATGATGGAAACACTTTTTGGATATAGTACTCCATCAATGGAGAAAAAAGGTGGACAGAAGAAAGAGCCTTCCTTCCGTGATGCTGCACCTCAGTTTACCCAAATCATTGAATCAAAGAAAGCACAAAATTTATCAATTCTGTTGAAAGCATTAAATGTGACACTTGAAGAAGTCCGTGATGCACTACTTGAAGGAAATGAGCTCCCAATAGAATTTCTTCACACCCTGATAAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTGGTTTATCTCAACTAGGTCCAGCAGATCGGTTCCTTAAATCCCTGGTTGAGATTCCCTTTGCTATTAAACGAATGGAAACATTGCTTTACATGAGTACTCTTCAAGAGGAACTCACCTCTACCCGGGATTCTTTCACAACTTTAGAGGTTGCTTGTAAGGAACTAAGGAGCAGTAGATTGTTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACAGGAAACCGGATGAACGACGGAACATTCCGCGGAGGTGCACTTGCATTCAAACTTGACACGCTACTAAAATTATCCGATGTAAAAGGAGTAGATGGGAAAATCACCCTCTTACACTTTGTTGTTCAAGAGATAATGCGAACAGAAGGAATAAGAGCAGCCCGAATGGTGAAAGAGAGCAGTAGTTTCTCTAGTATAAAAACCGAGGACCTTCTCGAAGACTTTAATCATGAATCAGAAGAACACTACCGCGAAATAGGTCTACAAGTAGTCTCACATTTGAGTAGTGATCTCGAGAATGTGAAGAAGGCGGCAGCATTAGATGCTGATGGTTTGACAAGCACAACAGCTAGATTAGGCTATGGTCTTGTAAAAACTCGTGATTTCTTAAACAAAGAACTTGTGAACAACTTAGAGAACGATAAAGGGTTCCATGAGACAGTTAAGAGTTTTGTGGAGAAAGCCGAGGTTGATGTCACAGGTTTGTTAGAAGAAGAGAAGAAAATCATGGCTCTTGTAAAGAGTACTGGTGATTACTTTCATGGGAGTACAGGGAGAGACGAAGGGTTGAGATTGTTTGTAATAGTACGCGATTTCTTAATAATGTTGGATAAGGTGTGCAGAGAGATTCAAAAAGCACCAAAGAAGCCAATAAAGAATGTAAAACAAGAAACAAGTAATGCTAATCCTAAAGGGCCGTCGAAGCCGGAAACTCGTCCTCCACCTCCAGATATTCGCCAGCGGTTGTTTCCGGCAGTGGTAGAGAGGAGAGTGGATGATTTTAGTTCAGATGAAGACAGTCCATAG 2613 0.4252 MRIRSMLQAEILCIICMEDLIHVTKDIGDLGLCLPKESHSRTNELTSESRSTTRENIQNLISTCNPQLKENFLNCLRKHHVPFQDQSKNLNTAYEESGSSRRYPRRVSPRYLAEKQDKDGGNDGSSKKDKSDNDSDKSSKKKSKSSESKRKQHEKAVYNAVAMTALVTFIFAACIFLCCCRCCGSGRVNQTDERPLLSMSRSDYSVDSSPNNNPSRFSLKEEKHGVQPISSILVDEKKNSMKEDATRPSFDLKPPPGRVGSGIPPLKPPPGRPDPLPPEPPSVKNFDYAVNPPPPPPPPGLQIPSSVGPLPPGLPRPGGGGPPPPPPPKLGNSGPKPPPPPPPRGKAGGPRPPPPPKGGVGPPRAPPPFGQKGTRPLPNGPKVQGKVEVSSEGEGEGEADDAPKTKLKPFFWDKVQANSDQTMVWTQLKAGSFQFNEEMMETLFGYSTPSMEKKGGQKKEPSFRDAAPQFTQIIESKKAQNLSILLKALNVTLEEVRDALLEGNELPIEFLHTLIKMAPTSEEELKLRLFSGGLSQLGPADRFLKSLVEIPFAIKRMETLLYMSTLQEELTSTRDSFTTLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKITLLHFVVQEIMRTEGIRAARMVKESSSFSSIKTEDLLEDFNHESEEHYREIGLQVVSHLSSDLENVKKAAALDADGLTSTTARLGYGLVKTRDFLNKELVNNLENDKGFHETVKSFVEKAEVDVTGLLEEEKKIMALVKSTGDYFHGSTGRDEGLRLFVIVRDFLIMLDKVCREIQKAPKKPIKNVKQETSNANPKGPSKPETRPPPPDIRQRLFPAVVERRVDDFSSDEDSP 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06755 870 SMART it6_source 397 820 IPR015425 -
Vivi2g06755 870 Coils Coil 479 499 - -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 87 154 - -
Vivi2g06755 870 ProSiteProfiles Formin homology-2 (FH2) domain profile. 397 831 IPR015425 -
Vivi2g06755 870 SUPERFAMILY Formin homology 2 domain (FH2 domain) 468 827 - -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 201 405 - -
Vivi2g06755 870 PANTHER FORMIN-RELATED 108 853 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi2g06755 870 MobiDBLite consensus disorder prediction 389 405 - -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 258 374 - -
Vivi2g06755 870 Pfam Formin Homology 2 Domain 400 805 IPR015425 -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 99 154 - -
Vivi2g06755 870 Gene3D Formin, FH2 domain 402 839 IPR042201 -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 819 852 - -
Vivi2g06755 870 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06755 Vivi-Chr2 205885930 205891143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06755 400 861 FH2 protein (formin) Gene Family AT5G54650 64.363 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06755 - - gmx:100792872 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06755 2 205885930 205891143 Vivi2g06755 2 205885930 205891143 ECH
Vivi2g06755 2 205885930 205891143 Vivi5g03539 5 127626908 127632194 PCT