Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06746 ATGAAAGAGGAATCTACAGGGTTAATTATTGGGATTTCTATTGGTGTTGTGATTGGAGTTGTTTTGGCTATTTCTGCATTGATCTGTTTTAGATATCATAGGAAGAGATCACAGATAGGGAATAGTAGTTCTCGGAGGGCGGCTACGATACCGATTCGCGCTAATGGTGCTGATTCTTGTACTATTTTATCAGATTCAACCTTAGCTCCTGAATCTCCTGTTAGGTCTGGGAGAAATGGCATGAATTTTTGGATTGATGGTTTCAAGAAGAGTAACATGGTTTCTGCATCTGGAATACTTGAATATTCATACAAGGACTTACAAAAGGCGACATATAATTTCACAACACTGATAGGACAAGGTGCATTTGGTCTTGTATATAAAGCTCAAATGTCTACCGGTGAGACTGTTGCGGTGAAAGTTCTTGCAACAAATTCTAAACAAGGGGAGAAAGAATTTCACACCGAGGTTATGTTGTTGGGAAGGTTGCACCACAGAAACTTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGTCAACATATGCTTGTTTATGTCTACATGAGTAAAGGCAACTTGGCTTCCCACTTGTACAGTGAAGAGAATGGGAATCTGGGATGGGATTTGAGGGTTCATATAGCGTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCCGTTCCTCCTGTCATCCACCGCGACATCAAATCTAACAATATTCTCTTGGATCAGTCGATGCGAGCACGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGACAAACATGCAGCTATTCGCGGTACCTTCGGCTATCTTGATCCCGAGTATATATCGTCAGGGACATTCACAAAGAAAAGTGATGTATACAGTTTCGGAGTGCTACTCTTTGAACTCATAGCCGGACGAAATCCTCAGCAGGGTCTAATGGAATATGTTGAACTCGCGGCGATGAACACGGAAGGGAAAGTTGGTTGGGAGGAGATAGTTGATTCAAAGCTCGAAGGAAAATGCGATTTCCAAGAGTTAAACGAAGTAGCAGCACTCGCATACAAATGCATCAACCGCGCCCCGAGGAAGCGTCCATCAATGAGGGACATAGTTCAAGTACTGACTCGGATCCTTAAAGCAAGGCACCAGAGGAATCATCATCACAAGAATTCGCTTTCGGAGACGGCAGATGAAGTTGCAATGGATATCGATGAGGCGGAAAATAAGGATTCTGTTACTACTGACCACCACAGAAGAGATGAATCTATAGATAGTACAACTGACACGTATGATTTGTGA 1299 0.428 MKEESTGLIIGISIGVVIGVVLAISALICFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLAPESPVRSGRNGMNFWIDGFKKSNMVSASGILEYSYKDLQKATYNFTTLIGQGAFGLVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSKLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRILKARHQRNHHHKNSLSETADEVAMDIDEAENKDSVTTDHHRRDESIDSTTDTYDL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06746 432 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06746 432 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 397 - -
Vivi2g06746 432 MobiDBLite consensus disorder prediction 407 432 - -
Vivi2g06746 432 CDD STKc_IRAK 118 377 - -
Vivi2g06746 432 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Vivi2g06746 432 Coils Coil 389 409 - -
Vivi2g06746 432 Gene3D Phosphorylase Kinase; domain 1 85 187 - -
Vivi2g06746 432 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06746 432 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Vivi2g06746 432 MobiDBLite consensus disorder prediction 407 426 - -
Vivi2g06746 432 SUPERFAMILY Protein kinase-like (PK-like) 104 387 IPR011009 -
Vivi2g06746 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Vivi2g06746 432 PANTHER OS01G0750732 PROTEIN 4 396 - -
Vivi2g06746 432 Gene3D Transferase(Phosphotransferase) domain 1 188 403 - -
Vivi2g06746 432 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06746 Vivi-Chr2 205845348 205848697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06746 24 374 Glycoside Hydrolase AT3G07070 39.459 5.08e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Vivi2g06746 PK_Tyr_Ser-Thr 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06746 - - gmx:100799586 761.14