Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06743 ATGGACTCTCAGCAACTTTATAGTTTCAATATGACAAGTGCAGGATTACCTAACATGTCATCTTTTTCCACTATTCCATCACTTCAAAATGGTTTGCTTGGTTCCTTGAAAGTCGGCATTGGAAACTCGCCCGATTCACCTTTTTCCTCTCATTTTGATTCGGATAACCTTTCTGCATTTGGTGACAACTATGAGCAACAGAACTCGGGTGAAACGCTCTCTGGTATAAGCGTCTCTTATAACTCTGCACTGGAAACCAATCGTTATGTGCATAGATCGGTTTCATCGGTTGATAATCTCAGAGAAAATTTGCAATTGTATTCAGCTAAAAGATCTCTTCCACCGAGCTGTAACCAGATAGTTCAACACGCCTTGTTGGAGCTAGAAACTGCGTTGATGGCTCCCGATGATAACGAAGTTACTACGTCTAATTCTTCATTGGGTGAGAGCATCAGGGAAACAGCATCTGGACCGAGATATAGATCATGGGGCCATGTGAGCCAAGGGTCACAGTATATTCAAAATCAACCATCACATGCTACTAGCAGCAGTAGGCAATCAAATGAAGTTGTGCACGTAGAAAAACGTCGAAAGTTGGAGGAGGAGTCATCTCTACAAGGGTTTCCGTCAGGCGATTTAAAGCAATTACTGATTGCATGTGCCAAAGCCATGGCTGAAAACAACACACAAGATTTCAACCAATTGATAGAAACGGCTAGAAATGCCGTGTCTATCAACGGGGAGCCGATCCAGAGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCGTCGGGGAATAGCATCTATCGTGCTCTTAAGTGTAGAGAGCCTGAGGGCGAAGAATTACTCACTTACATGCATCTGCTTTACGAAATCTGTCCCTACTTGAAATTTGGTTATATGGCTGCTAACGGAGCCATTGCGGAAGCTTGTAGGAATGAGGATCACATACATATCATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCTGCAAGACCCGGTGGTGCTCCCCATGTGCGTATCACAGGAATCGACGATCCAGTCTCTAGATATGCTCGTGGAGAAGGACTAGAAGTAGTCGGGAAAAGATTGGCCTTGATGTCAAAGAAATTCGGCATCCCAGTTGAGTTTCACGGGCTCTCCGTTTTCGGTCCCGATGTGACAAAAAACATGCTCGATATCAGACATGGAGAAGCTTTGGCTGTGAATTTTCCATTGCAACTCCATCACACAGCTGATGAGAGTGTTGATGTGAATAATCCAAGAGATGGACTTTTGAGAATGGTGAAATCTCTCTCTCCGAAAGTGGTCACACTCGTCGAGCAGGAATCAAACACAAACACAACCCCTTTCTTCAACAGGTTCGTAGAAACTTTAGATTACTACTTGGCAATCTTCGAGTCTATCGATGTCACACTCTCGAGAAACAGCAAGGACAGGATTAACGTGGAGCAGCATTGCTTGGCTCGGGATATCGTCAATATCATTGCTTGTGAAGGAAAGGAAAGGATTGAGCGACACGAACTGTTCGGAAAGTGGAAGTCCAGGCTGACAATGGCCGGATTTCGTCAATGTCCTTTGAGTTCTTATGTGAATTCTGTTATAAGAAGCCTTCTGAGATGCTACTCAGAGCATTATACATTAGTGGAGAAAGATGGAGCCATGTTGTTGGGGTGGAAGAACAGGAATTTGATATCAGCTTCAGCTTGGCATTGA 1752 0.4424 MDSQQLYSFNMTSAGLPNMSSFSTIPSLQNGLLGSLKVGIGNSPDSPFSSHFDSDNLSAFGDNYEQQNSGETLSGISVSYNSALETNRYVHRSVSSVDNLRENLQLYSAKRSLPPSCNQIVQHALLELETALMAPDDNEVTTSNSSLGESIRETASGPRYRSWGHVSQGSQYIQNQPSHATSSSRQSNEVVHVEKRRKLEEESSLQGFPSGDLKQLLIACAKAMAENNTQDFNQLIETARNAVSINGEPIQRLGAYMVEGLVARKEASGNSIYRALKCREPEGEELLTYMHLLYEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSRYARGEGLEVVGKRLALMSKKFGIPVEFHGLSVFGPDVTKNMLDIRHGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLSRNSKDRINVEQHCLARDIVNIIACEGKERIERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWH 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06743 583 MobiDBLite consensus disorder prediction 161 188 - -
Vivi2g06743 583 Pfam GRAS domain family 213 582 IPR005202 -
Vivi2g06743 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 171 579 IPR005202 -
Vivi2g06743 583 ProSiteProfiles GRAS family profile. 204 583 IPR005202 -
Vivi2g06743 583 MobiDBLite consensus disorder prediction 189 203 - -
Vivi2g06743 583 MobiDBLite consensus disorder prediction 137 152 - -
Vivi2g06743 583 MobiDBLite consensus disorder prediction 137 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06743 Vivi-Chr2 205717245 205719742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06743 204 582 GRAS Transcription Factor Family AT1G50600 62.533 2.31e-176 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi2g06743 GRAS 1.3e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06743 - - adu:107462432 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06743 2 205717245 205719742 Vivi2g06743 2 205717245 205719742 ECH
Vivi2g06743 2 205717245 205719742 Vivi7g02650 7 90367947 90370895 PCT