Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06740 ATGGCTGCCATATCTTCTCTTTCCGACGATTTTCTTTCTCCAATCTTATCACCGCCGTCCAAAAACGAAAAGATCTGCATCGACGACATGCTTCAGAAATACTGCGGCGAGTTTGGAAAGTGGCAGATGAAACACTTCATTCTCACTAGTCTCGCATGGGCACTGCAAGCTTTTCACTCCATGGTTATGATTTTCACTGATCGGGAGCCTGATTGGAAGTGTGTTTCTGGTATGGAGTGTTCTGCCGGTGGAAGTGTTTGCAGTATGTCACCGGAGTCGTGGGAGTGGATCGGCGGGAAAACTGCTTCTACGGTGTCGGAATGGAACTTGATTTGCGGTGATAAGTTTAAAGTTGGACTTGTTCAGGCAGTTTTCTTCGTCGGTTGTACCATTGGAGCTGGAGTATTTGGTCACCTTTCAGACTCATATCTAGGAAGAAAACGATCTCTCACTGTGGTTTGTGCCCTAAGCGCCATATTTGGCTGCTTAACAACTCTCTCTCCTAACTATTGGATCTACGTCCTCCTCCGCCTCCTCACTGGTTTCAGCAGCGGCGCGGTCGGTCTCTGCGCCTTCGTCCTTGCCACCGAACCCGTTGGCCCATCAAAACGTGGCACTGCAGGTTTGTGCACATTCTACTTCTTCTCCGGCGGCATCGCAATTCTCTCCGGTATTGCTTACATCTTCCAAACATGGCGCACACTCTATATGGTCACCTCCATTCCCTCTATCCTCTACATAATCCTAGTCCTCCCCTTCATCTCCGAGTCCCCGAGATGGTACCTCGTTCGAGGAAGAATAAAAGAAGCAACTACACTCATGGCCACCATTGCTTCCTTCAATGGGAATCATCTTCCAGAAGGAGTTGTCCTTGCACTCGACGAAGAAATATTAAACGCGAAAAATGAAACAAATGATCTTGATTCAGTGGATGCACAAGCTGGATCCATTGTCGATGTGATTCGCCACCCTGCTACACGTATTAGGTTAATTCTAGCTGTAGCTCTTAACTTCTTAAGCTCAGTGGTGTGGTATGGTTTAAGTTTAAATGTTAGAAATCTCGAAACCAACCTCTACATGAACGTGTTTCTGAATGCCGTTTCAGAGTTACCTGCGTTCATGCTAATGGCGGTGTTGTCGGTTAGATTCGGGAGAAAACCATTGACAATAGGGACAATGTGGTTTAGTGGATTCTTTTGTTTTATGGGGAGTTTGATGAGCAATGTGGGGGTGTGGAAAGTGATTAAGATGGTGTGTGGTATTTTAGGTATATTTGGAATAGCAGGGACTTATAATTTGTTGTTTATTTATACGACAGAGTTGTTTCCCACGGTGGTGAGGAACACCGCGCTAGGGAGTACAGCGCAGGCGGTGCAAATGGGGGCGATAGTGGTGCCTTTTGTGGTGGTTTTGGGTGGTTGGTTGCCGTTTGGGGTGTTTGCAGGATGTGGGATTTTAGGTGGGATCATTGCATTCTATTTGCCAGAGACATTGAATATGCCTCTTTATGATACATTCAAAGGATTGGAGGCTGGACTTGCATGA 1545 0.4647 MAAISSLSDDFLSPILSPPSKNEKICIDDMLQKYCGEFGKWQMKHFILTSLAWALQAFHSMVMIFTDREPDWKCVSGMECSAGGSVCSMSPESWEWIGGKTASTVSEWNLICGDKFKVGLVQAVFFVGCTIGAGVFGHLSDSYLGRKRSLTVVCALSAIFGCLTTLSPNYWIYVLLRLLTGFSSGAVGLCAFVLATEPVGPSKRGTAGLCTFYFFSGGIAILSGIAYIFQTWRTLYMVTSIPSILYIILVLPFISESPRWYLVRGRIKEATTLMATIASFNGNHLPEGVVLALDEEILNAKNETNDLDSVDAQAGSIVDVIRHPATRIRLILAVALNFLSSVVWYGLSLNVRNLETNLYMNVFLNAVSELPAFMLMAVLSVRFGRKPLTIGTMWFSGFFCFMGSLMSNVGVWKVIKMVCGILGIFGIAGTYNLLFIYTTELFPTVVRNTALGSTAQAVQMGAIVVPFVVVLGGWLPFGVFAGCGILGGIIAFYLPETLNMPLYDTFKGLEAGLA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06740 514 Gene3D MFS general substrate transporter like domains 80 507 IPR036259 -
Vivi2g06740 514 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 38 505 - -
Vivi2g06740 514 SUPERFAMILY MFS general substrate transporter 114 502 IPR036259 -
Vivi2g06740 514 Pfam Sugar (and other) transporter 115 503 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi2g06740 514 ProSitePatterns Sugar transport proteins signature 2. 179 204 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi2g06740 514 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 499 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06740 Vivi-Chr2 205606030 205620035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06740 14 510 Organic Solute Cotransporters AT3G20660 64.588 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06740 K08202 - gmx:100818415 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06740 2 205606030 205620035 Vivi2g06740 2 205606030 205620035 ECH
Vivi2g06740 2 205606030 205620035 Vivi7g00253 7 14974396 14975594 PCT