Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06734 ATGGCTGATGATGATCAATTTCATCATACAAGTGGAAACTGGTGGGAATCAGCATCAAGAAACATGAGATTTGATCAAAGTGGTGGAACATCACAACAATCTTCTTCTTCTGCCATCACCAACAATAATATTGTTGATTTTGGTTGGCAAAATTCAGATATGGTTGAGATTAAACCAAGATCTTCCTTGGATAATTCTTCTGTGGTTTTTCATGATACTCGGAAACTCGAACAAAATCAAGATTCTTCGAATTCTACTGACCCCAACTTGCATATGATGGGTTTGGGACTTTCTTCTCATTCCATGGAGTGGAATCAGCCATCTTTGATAAGAGGTGATGAAAAGGGAACAGAAAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTCGAGCAAGAAAATGTGATGGGAATGTGTCAACAAGTGAATAGAAATTTTTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGTTCTGGAGACAGCAATGTTATTCAAATGGATTCTTCAGCTTTATATGGAACACCATCAATTTTACAAGGCTCATCTATGAGTAGTTTTCCATATGCAACAAATAACTATGGATTATTGAACTCGAATAATGAGTTGAATATGAACATGCCTTGTAATAATTGGTCTAACAATAAAGTTCCTCAGTTTTTGATGAGAACTTCACCTCCAAAACAATCATCAACAAATAACCAGTTGCATTTTACTAATAACACCCCTTTTTGGAATGCTTCTGAGGCTCCTAATTCTATTAAGGATGTTAGGTCAAGTTTCTTCCCCTCTTTGCAACCTCAATTCTCCACACCAAATTTTGATTCACACTCAAAGAATATAAGTGAAGTGAATACTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACTCGTAACGAAACTCCATCAACTTTGCCAGCTTTTAAGGTCAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATACATCAAATTTCTTCATGAACAGGTTACACTTTTGAGCACTCCATATATGAAAAGTGGAGCTTCATCAGAGATTCAACAGAATTCGGGTAAAACAAAAAAATCCGATGGCGCGAAGCAAGATCTAAGAAGTCGAGGTCTATGTTTGGTACCGATTTCAAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGAACATCAAGATAA 1287 0.373 MADDDQFHHTSGNWWESASRNMRFDQSGGTSQQSSSSAITNNNIVDFGWQNSDMVEIKPRSSLDNSSVVFHDTRKLEQNQDSSNSTDPNLHMMGLGLSSHSMEWNQPSLIRGDEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNFSLDQNQFSPQYSSGDSNVIQMDSSALYGTPSILQGSSMSSFPYATNNYGLLNSNNELNMNMPCNNWSNNKVPQFLMRTSPPKQSSTNNQLHFTNNTPFWNASEAPNSIKDVRSSFFPSLQPQFSTPNFDSHSKNISEVNTVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTLLSTPYMKSGASSEIQQNSGKTKKSDGAKQDLRSRGLCLVPISSTFPVTHETTVDFWTPTFGGTSR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06734 428 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 308 357 IPR011598 GO:0046983
Vivi2g06734 428 CDD bHLH_AtbHLH_like 314 365 IPR045239 -
Vivi2g06734 428 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 409 - -
Vivi2g06734 428 Gene3D - 318 381 IPR036638 GO:0046983
Vivi2g06734 428 SMART finulus 319 363 IPR011598 GO:0046983
Vivi2g06734 428 FunFam Transcription factor bHLH123 family 318 380 - -
Vivi2g06734 428 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 370 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06734 Vivi-Chr2 205465338 205469244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06734 242 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.121 1.82e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06734 - - gmx:100778697 543.888