Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06732 ATGGCTGATGATGATCAATTTCATCATACAAGTGGAAACTGGTGGGAATCAGCATCAAGAAACATGAGATTTGATCAAAGTGGTGGAACATCACAACAATCTTCTTCTTCTGCCATCACCAACAATAATATTGTTGATTTTGGTTGGCAAAATTCAGATATGGTTGAGATTAAACCAAGATCTTCCTTGGATAATTCTTCTGTGGTTTTTCATGATACTCGGAAACTCGAACAAAATCAAGATTCTTCGAATTCTACTGACCCCAACTTGCATATGATGGGTTTGGGACTTTCTTCTCATTCCATGGAGTGGAATCAGCCATCTTTGATAGGTGATGAAAAGGGAACAGAAAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTCGAGCAAGAAAATGTGATGGGAATGTGTCAACAAGTGAATAGAAATTTTTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGTTCTGGAGACAGCAATGTTATTCAAATGGATTCTTCAGCTTTATATGGAACACCATCAATTTTACAAGGCTCATCTATGAGTAGTTTTCCATATGCAACAAATAACTATGGATTATTGAACTCGAATAATGAGTTGAATATGAACATGCCTTGTAATAATTGGTCTAACAATAAAGTTCCTCAGTTTTTGATGAGAACTTCACCTCCAAAACAATCATCAACAAATAACCAGTTGCATTTTACTAATAACACCCCTTTTTGGAATGCTTCTGAGGCTCCTAATTCTATTAAGGATGTTAGGTCAAGTTTCTTCCCCTCTTTGCAACCTCAATTCTCCACACCAAATTTTGATTCACACTCAAAGAATATAAGTGAAGTGAATACTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACTCGTAACGAAACTCCATCAACTTTGCCAGCTTTTAAGGTCAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATACATCAAATTTCTTCATGAACAGGTTACACTTTTGAGCACTCCATATATGAAAAGTGGAGCTTCATCAGAGATTCAACAGAATTCGGGTAAAACAAAAAAATCCGATGGCGCGAAGCAAGATCTAAGAAGTCGAGGTCTATGTTTGGTACCGATTTCAAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGAACATCAAGATAA 1284 0.3731 MADDDQFHHTSGNWWESASRNMRFDQSGGTSQQSSSSAITNNNIVDFGWQNSDMVEIKPRSSLDNSSVVFHDTRKLEQNQDSSNSTDPNLHMMGLGLSSHSMEWNQPSLIGDEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNFSLDQNQFSPQYSSGDSNVIQMDSSALYGTPSILQGSSMSSFPYATNNYGLLNSNNELNMNMPCNNWSNNKVPQFLMRTSPPKQSSTNNQLHFTNNTPFWNASEAPNSIKDVRSSFFPSLQPQFSTPNFDSHSKNISEVNTVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTLLSTPYMKSGASSEIQQNSGKTKKSDGAKQDLRSRGLCLVPISSTFPVTHETTVDFWTPTFGGTSR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06732 427 FunFam Transcription factor bHLH123 family 317 379 - -
Vivi2g06732 427 Gene3D - 317 380 IPR036638 GO:0046983
Vivi2g06732 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Vivi2g06732 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 369 IPR036638 GO:0046983
Vivi2g06732 427 CDD bHLH_AtbHLH_like 313 364 IPR045239 -
Vivi2g06732 427 SMART finulus 318 362 IPR011598 GO:0046983
Vivi2g06732 427 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 145 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06732 Vivi-Chr2 205465336 205469248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06732 241 427 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.121 1.77e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06732 - - gmx:100778697 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06732 2 205465336 205469248 Vivi2g06732 2 205465336 205469248 ECH