Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06723 ATGGAAATCTTCAAAGTGCTAGTTTATTGTTTTCTTCTCTTCCACTTCATACCAACCTTCAATACCTTGGAAACCATTCTTCCTGGACAATCAATCCAAGGTAATGAGACTTTAATCTCTACAAATGGAACTTTTGAAGCAGGTTTCTTCAACTTTGATAATTCAAATAACCAATATTTTGGTATATGGTACAAGGACATTTCACCAAGAACTGTTGTCTGGATAGCCAACAGAGATTCTCCATTAGAAAACTCATCAGGAGTTTTGAATCTCACTGATAAAGGAACTCTGGTTATTGTTGATGATTCCAAGGTTATGATATGGTCCTCTAACAAATCAACAACAGCTGCAAAACCAATTTTGCAACTCTTGGAAAATGGAAACCTTGTAGTGAAAGATGAAACCAAACAAGATAATATTTTGTGGCAAAGTTTTGATTTTCCTGGTGACACTTTACTCCCAGGTATGAGTATCACAAGTAGTTTAGTAAACGGCGATTATAAAGGTTTGGTTTCGTGGAGAAATACACAAGATCCTTCTACAGGTTTGTATTCATATTATATAGATACTAATGGTTTTCCTCAAGTAGTGATTAAGAAAGGAAACACATTAGTGACTAGAGTTGGTTCATGGAACGGATATAGTTTATCAGGATTTTCTTCGGTGAATCTTTACAAAACCTTTAGTAACATTTTTGTGATTACTGAAAAGGAAGTTTCTTATGGATATGAACTTCTGAACAATTCAACTGTTTCAAGGTACTTGCTTGATTCGGAGGGACAAATAACACGTTACTTTCTGTCGGATGATAGAAAAAGTTGGCAAATTTTCTTCATTGGCCCAATAGATCAGTGTGACAATTATGCTAAGTGTGGTGCAAATTCTTATTGTGATACTGATAATTCTCCAATCTGTGAGTGTCTTGATGGTTTCATTCCGAAATCTCGAGAAAAATGGAATTCGCAAAATTGGACTGATGGTTGTGTTAGGAGAGTGAAGTTAGTTTGTGATGATAATAGTGATGGTTTTTTGAAGCAAGTGGAAATGAAGCTGCCAGATACATCAAAATCTTGGTTTAATAAGAGCATAAACCTTGAAGAATGTGAGAGATTCTGTTTAAGAAACTGTTCTTGCACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGATTTGGTTTAAAAACATTTTGGATGTCAAAAAACTAAGCTCTGGGGGACAAGACTTTTACATGCGAGTTGCAGCTTCAGAACTAGCAGCTGCTAGGACTGGTTTGAACAAGAAGAAGATTGCAGGAATTCTAGTAGGCTGTATAATGTTTGTTGTGATCATGATAATACTTGGAGTTGCCATACATCGCGTCCGGAAGAAGAAACTAGCGAAACAAGGGAATAATCAACCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCTAATGCAACTAATAGCTTCTCCATTGATAACAAATTAGGGCAGGGAGGTTTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCACAGAAATCTTGTGAAGCTACTTGGCTGCTGCATTCAAAATGATGAGAAACTCTTGATCTATGAATTCATGACCAACACAAGCTTGGACTACTTCACTTTTGACCAAACTAGAAAAAGTTTACTGCATTGGACTCGGCGATTCCAAATTATCCGCGGGATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCAAGATTAAGGATTATCCACCGAGATCTCAAGACAAGCAATATTCTTCTTGACGAAAATATGAATCCTAAAATATCAGACTTCGGCCTGGCTAGAACATTATGGGGAGATGAAGCAAAAGGCGAAACAAGAAGAATAGTAGGAACTCATGGTTACATGTCTCCAGAGTATGCAGCACGCGGATTTTTCTCTGTGAAGTCAGATGTATTTAGTTTTGGTGTTATTATACTAGAGACAATCAGTGGAAAAAAGAATAGACAATATAGTGACTATCATGATCTCGATCTTCTTGGATATGCATGGAGAATGTGGTGTGAAAAAACACCGTTGGAGCTGATAGACGAGTCTCTAAGCGATTCGATTGTTGTAGAAGAACTAGAAATTATGAGATGTATTCAGATAGGGTTATTATGTGTTCAAGAGAGAGCTGATGATAGGCCATCTATGTCAGCTGCAGTTCTAATGTTGAATGGTGAGAAAACATTGCCTGAGCCAAAGGAACCAGCCTTTTATCCACGCCAGTTTGGTTCTTCTTCAGGAGGACCTGTTGAGCTGCATTCAAACAATGAAGTTTCCATGACATCATTACAAGCAAGATAG 2436 0.3707 MEIFKVLVYCFLLFHFIPTFNTLETILPGQSIQGNETLISTNGTFEAGFFNFDNSNNQYFGIWYKDISPRTVVWIANRDSPLENSSGVLNLTDKGTLVIVDDSKVMIWSSNKSTTAAKPILQLLENGNLVVKDETKQDNILWQSFDFPGDTLLPGMSITSSLVNGDYKGLVSWRNTQDPSTGLYSYYIDTNGFPQVVIKKGNTLVTRVGSWNGYSLSGFSSVNLYKTFSNIFVITEKEVSYGYELLNNSTVSRYLLDSEGQITRYFLSDDRKSWQIFFIGPIDQCDNYAKCGANSYCDTDNSPICECLDGFIPKSREKWNSQNWTDGCVRRVKLVCDDNSDGFLKQVEMKLPDTSKSWFNKSINLEECERFCLRNCSCTAYANLDIRDGGSGCLIWFKNILDVKKLSSGGQDFYMRVAASELAAARTGLNKKKIAGILVGCIMFVVIMIILGVAIHRVRKKKLAKQGNNQPNNNDNEDIDIPIFDLSTIANATNSFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQNDEKLLIYEFMTNTSLDYFTFDQTRKSLLHWTRRFQIIRGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRIVGTHGYMSPEYAARGFFSVKSDVFSFGVIILETISGKKNRQYSDYHDLDLLGYAWRMWCEKTPLELIDESLSDSIVVEELEIMRCIQIGLLCVQERADDRPSMSAAVLMLNGEKTLPEPKEPAFYPRQFGSSSGGPVELHSNNEVSMTSLQAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06723 811 CDD STKc_IRAK 502 770 - -
Vivi2g06723 811 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi2g06723 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 776 - -
Vivi2g06723 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 145 - -
Vivi2g06723 811 MobiDBLite consensus disorder prediction 777 811 - -
Vivi2g06723 811 SUPERFAMILY Protein kinase-like (PK-like) 477 768 IPR011009 -
Vivi2g06723 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Vivi2g06723 811 SMART blect_4 29 148 IPR001480 -
Vivi2g06723 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 571 - -
Vivi2g06723 811 Gene3D Phosphorylase Kinase; domain 1 469 571 - -
Vivi2g06723 811 SMART serkin_6 496 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06723 811 ProSiteProfiles Protein kinase domain profile. 496 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06723 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi2g06723 811 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Vivi2g06723 811 Gene3D Transferase(Phosphotransferase) domain 1 572 778 - -
Vivi2g06723 811 Pfam PAN-like domain 336 403 IPR003609 -
Vivi2g06723 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 417 - -
Vivi2g06723 811 CDD PAN_AP_plant 332 418 - -
Vivi2g06723 811 SMART ntp_6 338 417 IPR003609 -
Vivi2g06723 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Vivi2g06723 811 CDD B_lectin 30 148 IPR001480 -
Vivi2g06723 811 Gene3D - 20 145 IPR036426 -
Vivi2g06723 811 Pfam Protein tyrosine and serine/threonine kinase 497 708 IPR001245 GO:0004672|GO:0006468
Vivi2g06723 811 MobiDBLite consensus disorder prediction 792 811 - -
Vivi2g06723 811 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Vivi2g06723 811 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Vivi2g06723 811 Gene3D Hepatocyte Growth Factor 334 416 - -
Vivi2g06723 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06723 Vivi-Chr2 205277151 205280445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06723 428 785 Receptor kinase-like Gene Family AT4G23190 51.366 1.55e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06723 PK_Tyr_Ser-Thr 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06723 - - vum:124842963 1145.95