Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06722 ATGGAAATCTTCAAAGTGCTAGTTTATTGTTTTCTTCTCTTCCACTTCATACCAACCTTCAATACCTTGGAAACCATTCTTCCTGGACAATCAATCCAAGGTAATGAGACTTTAATCTCTACAAATGGAACTTTTGAAGCAGGTTTCTTCAACTTTGATAATTCAAATAACCAATATTTTGGTATATGGTACAAGGACATTTCACCAAGAACTGTTGTCTGGATAGCCAACAGAGATTCTCCATTAGAAAACTCATCAGGAGTTTTGAATCTCACTGATAAAGGAACTCTGGTTATTGTTGATGATTCCAAGGTTATGATATGGTCCTCTAACAAATCAACAACAGCTGCAAAACCAATTTTGCAACTCTTGGAAAATGGAAACCTTGTAGTGAAAGATGAAACCAAACAAGATAATATTTTGTGGCAAAGTTTTGATTTTCCTGGTGACACTTTACTCCCAGGTATGAGTATCACAAGTAGTTTAGTAAACGGCGATTATAAAGGTTTGGTTTCGTGGAGAAATACACAAGATCCTTCTACAGGTTTGTATTCATATTATATAGATACTAATGGTTTTCCTCAAGTAGTGATTAAGAAAGGAAACACATTAGTGACTAGAGTTGGTTCATGGAACGGATATAGTTTATCAGGATTTTCTTCGGTGAATCTTTACAAAACCTTTAGTAACATTTTTGTGATTACTGAAAAGGAAGTTTCTTATGGATATGAACTTCTGAACAATTCAACTGTTTCAAGGTACTTGCTTGATTCGGAGGGACAAATAACACGTTACTTTCTGTCGGATGATAGAAAAAGTTGGCAAATTTTCTTCATTGGCCCAATAGATCAGTGTGACAATTATGCTAAGTGTGGTGCAAATTCTTATTGTGATACTGATAATTCTCCAATCTGTGAGTGTCTTGATGGTTTCATTCCGAAATCTCGAGAAAAATGGAATTCGCAAAATTGGACTGATGGTTGTGTTAGGAGAGTGAAGTTAGTTTGTGATGATAATAGTGATGGTTTTTTGAAGCAAGTGGAAATGAAGCTGCCAGATACATCAAAATCTTGGTTTAATAAGAGCATAAACCTTGAAGAATGTGAGAGATTCTGTTTAAGAAACTGTTCTTGCACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGATTTGGTTTAAAAACATTTTGGATGTCAAAAAACTAAGCTCTGGGGGACAAGACTTTTACATGCGAGTTGCAGCTTCAGAACTAGCAGCTGCTAGGACTGGTTTGAACAAGAAGAAGATTGCAGGAATTCTAGTAGGCTGTATAATGTTTGTTGTGATCATGATAATACTTGGAGTTGCCATACATCGCGTCCGGAAGAAGAAACTAGCGAAACAAGTTTTAAAATGCATTTCACACTTATTGTTCTATCCTTTATCAGGGAATAATCAACCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCTAATGCAACTAATAGCTTCTCCATTGATAACAAATTAGGGCAGGGAGGTTTTGGACCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCACAGAAATCTTGTGAAGCTACTTGGCTGCTGCATTCAAAATGATGAGAAACTCTTGATCTATGAATTCATGACCAACACAAGCTTGGACTACTTCACTTTTGACCAAACTAGAAAAAGTTTACTGCATTGGACTCGGCGATTCCAAATTATCCGCGGGATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCAAGATTAAGGATTATCCACCGAGATCTCAAGACAAGCAATATTCTTCTTGACGAAAATATGAATCCTAAAATATCAGACTTCGGCCTGGCTAGAACATTATGGGGAGATGAAGCAAAAGGCGAAACAAGAAGAATAGTAGGAACTCATGGTTACATGTCTCCAGAGTATGCAGCACGCGGATTTTTCTCTGTGAAGTCAGATGTATTTAGTTTTGGTGTTATTATACTAGAGACAATCAGTGGAAAAAAGAATAGACAATATAGTGACTATCATGATCTCGATCTTCTTGGATATGCATGGAGAATGTGGTGTGAAAAAACACCGTTGGAGCTGATAGACGAGTCTCTAAGCGATTCGATTGTTGTAGAAGAACTAGAAATTATGAGATGTATTCAGATAGGGTTATTATGTGTTCAAGAGAGAGCTGATGATAGGCCATCTATGTCAGCTGCAGTTCTAATGTTGAATGGTGAGAAAACATTGCCTGAGCCAAAGGAACCAGCCTTTTATCCACGCCAGTTTGGTTCTTCTTCAGGAGGACCTGTTGAGCTGCATTCAAACAATGAAGTTTCCATGACATCATTACAAGCAAGATAG 2478 0.3688 MEIFKVLVYCFLLFHFIPTFNTLETILPGQSIQGNETLISTNGTFEAGFFNFDNSNNQYFGIWYKDISPRTVVWIANRDSPLENSSGVLNLTDKGTLVIVDDSKVMIWSSNKSTTAAKPILQLLENGNLVVKDETKQDNILWQSFDFPGDTLLPGMSITSSLVNGDYKGLVSWRNTQDPSTGLYSYYIDTNGFPQVVIKKGNTLVTRVGSWNGYSLSGFSSVNLYKTFSNIFVITEKEVSYGYELLNNSTVSRYLLDSEGQITRYFLSDDRKSWQIFFIGPIDQCDNYAKCGANSYCDTDNSPICECLDGFIPKSREKWNSQNWTDGCVRRVKLVCDDNSDGFLKQVEMKLPDTSKSWFNKSINLEECERFCLRNCSCTAYANLDIRDGGSGCLIWFKNILDVKKLSSGGQDFYMRVAASELAAARTGLNKKKIAGILVGCIMFVVIMIILGVAIHRVRKKKLAKQVLKCISHLLFYPLSGNNQPNNNDNEDIDIPIFDLSTIANATNSFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQNDEKLLIYEFMTNTSLDYFTFDQTRKSLLHWTRRFQIIRGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRIVGTHGYMSPEYAARGFFSVKSDVFSFGVIILETISGKKNRQYSDYHDLDLLGYAWRMWCEKTPLELIDESLSDSIVVEELEIMRCIQIGLLCVQERADDRPSMSAAVLMLNGEKTLPEPKEPAFYPRQFGSSSGGPVELHSNNEVSMTSLQAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06722 825 Gene3D Phosphorylase Kinase; domain 1 484 585 - -
Vivi2g06722 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 145 - -
Vivi2g06722 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 773 - -
Vivi2g06722 825 SMART blect_4 29 148 IPR001480 -
Vivi2g06722 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Vivi2g06722 825 MobiDBLite consensus disorder prediction 791 825 - -
Vivi2g06722 825 CDD STKc_IRAK 516 784 - -
Vivi2g06722 825 Pfam Protein tyrosine and serine/threonine kinase 511 722 IPR001245 GO:0004672|GO:0006468
Vivi2g06722 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Vivi2g06722 825 Gene3D Hepatocyte Growth Factor 334 416 - -
Vivi2g06722 825 SUPERFAMILY Protein kinase-like (PK-like) 491 782 IPR011009 -
Vivi2g06722 825 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Vivi2g06722 825 Pfam PAN-like domain 336 403 IPR003609 -
Vivi2g06722 825 SMART serkin_6 510 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06722 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 417 - -
Vivi2g06722 825 CDD PAN_AP_plant 332 418 - -
Vivi2g06722 825 SMART ntp_6 338 417 IPR003609 -
Vivi2g06722 825 CDD B_lectin 30 148 IPR001480 -
Vivi2g06722 825 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi2g06722 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 790 - -
Vivi2g06722 825 Gene3D - 20 145 IPR036426 -
Vivi2g06722 825 Gene3D Transferase(Phosphotransferase) domain 1 586 792 - -
Vivi2g06722 825 ProSiteProfiles Protein kinase domain profile. 510 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06722 825 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Vivi2g06722 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Vivi2g06722 825 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Vivi2g06722 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 585 - -
Vivi2g06722 825 MobiDBLite consensus disorder prediction 806 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06722 Vivi-Chr2 205277150 205280448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06722 428 799 Receptor kinase-like Gene Family AT4G23190 50.000 2.06e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06722 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06722 - - vum:124842963 1139.79