Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06719 ATGGAAAGCTTCAAAGTGCTAGTTTATTGTTTTCTTCTCTTTCCCTTCATACCAACCTTCAATACCTTGGAAACCATTCTTCCTGGACAATCAATCAAAGGTAATGAGACTCTAATCACTACAAATGGAACTTTTGAAGCAGGTTTCTTCAACTTTGATAATTCAAATAACCAATATTTTGGTATATGGTACAAGGACATTTCACCAAGAACTGTTGTGTGGATAGCAAACAGAGATTCTCCATTAGAAAACTCATCAGGAGTTTTGAATCTCACTGATAAAGGAACTCTGGTTATTGTTGATGATTCCAAGGTTATGATATGGTCCTCTAACAAATCAACAACAGCTGCAAAACCAATTTTGCAACTCTTGGAAAATGGAAACCTTGTTGTGAAAGATGAAACCAAACAAGATAATATTTTGTGGCAAAGTTTTGATTTTCCTGGTGACACTTTACTCCCAGGTATGAGAATCACAAGTAGTTTAGTAAATGGCGATTATAAGGGTTTGGTTTCGTGGAGAAATACGCAAGATCCTTCTACAGGTTTGTATTCATATCATATAGATACTAATGGTTTTCCTCAAATAGTGATTAAGAAAGGAAACACATTAGTGACTAGAGTTGGTTCATGGAACGGAAATAGTTTATCAGGATTTTCTTCGGTGGATCTTTACAAAACCTTTAATATCATTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGACCTTCTGGACAGTTCAACTGTTTCAAGGTTCTTGCTTAATTCGGAGGGACAAGCAGCACGTTACTTTCTGTTGGATGATAGAAAAACTTGGCGAATTTTCTTCATTGGCTCAACCGATATGTGTGACAATTATGCTAAATGTGGTGCAAATTCTTATTGTGATAATGATAATTCTCCAATATGTGAATGTCTTAGTGGTTTCATTCCGAAATCTCAGGCAAAATGGAATTCACAAAATTGGACTGATGGTTGTGTAAGGAGAGTGAAGTTAGATTGTGGTGATAATAATAGTGATGGTTTTTTGAAGCAAGTGGGGATGAAGCTGCCAGATACATCAAAATCTTGGTTTAATAAAAGCATGAACCTTGAAGAATGTGAGGGATTCTGTTTAAGAAACTGTTCCTGCACAGGTTATGCAAATTTAGATATCAGAAATGGTGGAAGTGGTTGCTTGGTTTGGTTTAATAACACTCTGGATGTCAAAAAACTAAGCTCTGGAGGACAAGACTTTTACATGAGAGTTGCAGCTTCAGAACTAGCAGCTGCTAGGACTGGTTTGAACAAGAAGAAGCTTGCAGGAATTCTAGTAGGCTGTATAATGTTTGTTGTGATCATGATGATAATACTTGGAATCGCCATACATCGTGTCCGGAAGAAGAAACTAGCGAAACAAGGGAATAATCAAGTATTTAGCTTGAATAATCAACCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCTAATGCAACTAATAGCTTCTCCATTGATAACAAATTGGGGCAGGGAGGTTTTGGGCCAGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCATAGAAATCTTGTGAAGCTACTTGGCTGTTGCATTCAAAATGATGAGAAACTCTTGATCTATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTCGATCAAACTAGAAAAAGTTTACTGCATTGGACTCGACGGTTCCAAATTATCCGCGGGATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCAAGATTAAGAATTATCCACCGAGATCTCAAGACAAGCAATATTCTTCTTGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTAAAGGCGAAACAAGAAGAGTAGTAGGAACTCATGGTTACATGTCTCCAGAGTATGCAAGACGCGGATTTTTCTCTGTGAAGTCAGATGTATTTAGTTTTGGTGTTATTATACTAGAGACAATCAGTGGAAAAAAGAATAGAGAATATAGTGACTATCATGATCTCGATCTTCTTGGATATGCATGGAGAAGGTGGTGTGAAAAAGCGCCGTTGGAGCTGATAGACGAGTCTCTAAGCGATTCGATTGTTGTAGAAGAACTAGAAATTATGAGATGTATTCAGATAGGGTTATTATGTGTTCAAGAGAGAGCTGATGATAGGCCATCTATGTCAGCTGCAGTTCTAATGTTGAATGGTGAGAAAACATTGCCAGAGCCAAAGGAACCAGCCTTTTATCCACACAAGTTTGGTTCTTCCTCAGGAGGAACTGTTGAGCTGCATTCAAACAATGAAGTTTCCATAACATCATTACAAGCAAGATAG 2463 0.3699 MESFKVLVYCFLLFPFIPTFNTLETILPGQSIKGNETLITTNGTFEAGFFNFDNSNNQYFGIWYKDISPRTVVWIANRDSPLENSSGVLNLTDKGTLVIVDDSKVMIWSSNKSTTAAKPILQLLENGNLVVKDETKQDNILWQSFDFPGDTLLPGMRITSSLVNGDYKGLVSWRNTQDPSTGLYSYHIDTNGFPQIVIKKGNTLVTRVGSWNGNSLSGFSSVDLYKTFNIIFVITEKEVSYGYDLLDSSTVSRFLLNSEGQAARYFLLDDRKTWRIFFIGSTDMCDNYAKCGANSYCDNDNSPICECLSGFIPKSQAKWNSQNWTDGCVRRVKLDCGDNNSDGFLKQVGMKLPDTSKSWFNKSMNLEECEGFCLRNCSCTGYANLDIRNGGSGCLVWFNNTLDVKKLSSGGQDFYMRVAASELAAARTGLNKKKLAGILVGCIMFVVIMMIILGIAIHRVRKKKLAKQGNNQVFSLNNQPNNNDNEDIDIPIFDLSTIANATNSFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQNDEKLLIYEFMINRSLDYFIFDQTRKSLLHWTRRFQIIRGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRVVGTHGYMSPEYARRGFFSVKSDVFSFGVIILETISGKKNREYSDYHDLDLLGYAWRRWCEKAPLELIDESLSDSIVVEELEIMRCIQIGLLCVQERADDRPSMSAAVLMLNGEKTLPEPKEPAFYPHKFGSSSGGTVELHSNNEVSITSLQAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06719 820 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi2g06719 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 580 - -
Vivi2g06719 820 CDD PAN_AP_plant 332 419 - -
Vivi2g06719 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 145 - -
Vivi2g06719 820 Gene3D Transferase(Phosphotransferase) domain 1 581 787 - -
Vivi2g06719 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Vivi2g06719 820 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Vivi2g06719 820 Pfam Protein tyrosine and serine/threonine kinase 506 718 IPR001245 GO:0004672|GO:0006468
Vivi2g06719 820 Gene3D - 20 145 IPR036426 -
Vivi2g06719 820 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Vivi2g06719 820 SMART blect_4 29 148 IPR001480 -
Vivi2g06719 820 CDD B_lectin 30 148 IPR001480 -
Vivi2g06719 820 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Vivi2g06719 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 768 - -
Vivi2g06719 820 SMART ntp_6 339 418 IPR003609 -
Vivi2g06719 820 CDD STKc_IRAK 511 779 - -
Vivi2g06719 820 ProSiteProfiles Protein kinase domain profile. 505 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06719 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Vivi2g06719 820 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Vivi2g06719 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 785 - -
Vivi2g06719 820 SMART serkin_6 505 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06719 820 Pfam PAN-like domain 336 404 IPR003609 -
Vivi2g06719 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 418 - -
Vivi2g06719 820 Gene3D Hepatocyte Growth Factor 337 417 - -
Vivi2g06719 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Vivi2g06719 820 SUPERFAMILY Protein kinase-like (PK-like) 488 777 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06719 Vivi-Chr2 205225335 205228877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06719 436 794 Receptor kinase-like Gene Family AT4G23190 50.270 1.34e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06719 PK_Tyr_Ser-Thr 8.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06719 - - vum:124842963 1154.43