Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06718 ATGATATGGTCCTCTAACAAATCAACAACAGCTGCAAAACCAAGTTTGCAACTCTTGGAGAATGGAAACCTTGTTGTGAAAGATGAAACCAAACAAGATAATATTTTGTGGCAAAGTTTTGATTTTCCTGGTGACACTTTACTCCCAGGTATGAGAATCACAAGTAGTTTAGTAAATGGCGATTATAAAGGTTTGGTTTCGTGGACAGATACGCAAGATCCTTCTACTGGTTTGTATTCATATCATATAGATACTAATGGTTATCCTCAAGTAGTGATTAAGAAAGGAAACATATTAGTAACTAGAGTTGGTTCATGGAACGGAAATAGTTTATCAGGATTTTCTTCGGCGGATCTTTACAAAACCTTTAATATCACTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGAACTTCTGGACAGTTCAATGGTTTCAAGGTACTTGCTTAACTCGGCGGGACAAATAACACGTTTCTCGCTGTCTGATGATAGAAAAAGTTGGCAAATTTTCTTCATTGGCCCAATAGATCGGTGTGACAATTATGCTAAGTGTGGTGCAAATTCTTATTGTGATGCTGATAATTCTCCGATCTGTGAGTGTCTTGATGGTTTCATTCCGAAATCTCGAGAAAAATGGAATTCGCAAAATTGGACTGATGGTTGTGTTAGGAGAGTGAAGTTAGATTGTGATGATAATAGTGATGGTTTTTTGAAGCAAGTGGGGGTGAAGCTGCCAGATACATCAAAATCTTGGTTTAATAAAAGCATGAACCTTGAAGAATGTGAGGGATTCTGTTTAAGAAACTGTTCTTGCACAGGTTATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGGTTTGGTTTAATAACATTTTGGATGTCAAAAAGCTAAGCTCTGGAGGACAAGACTTTTACATGAGAGTTGCAGCTTCTGAACTAAGTGCTCACACAGGTTTGAACAAGAAGAAGCTTGCAGGAATTCTAGTAGGCTGTATAATGTTTGTTGCGATCATGATAATACTTGGAGTCACCATACATCGCGTCCGGAAGAAGAAACTAGCGAAACAAGGGAATAATCAAGTATTCAGCTTGAATAATCTTTCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCAAATGCAACTAATAACTTCTCCATTGATAACAAATTGGGGCAGGGAGGTTTTGGGCCGGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCATAGAAATCTTGTTAAACTAGTTGGTTGTTGCATTCAAAATGATGAGAAACTCTTGATTTATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTCGACCAAACTAGAAAGAGTTTACTGCATTGGACTCGACGGTTCCAAATTATCGGCGGTATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCAAGATTAAGAATTATTCACCGAGATCTCAAGACAAGCAATATTCTTCTAGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTAAAGGTGAAACAAGAAGAATAGTAGGAACTCATGGTTACATATCTCCAGAGTATGCAACACGCGGATTTTTCTCAGTGAAGTCAGATGTATTTAGCTTTGGTGTTATTATACTAGAGACAATCAGTGGAAAAAAGAATAGAGAATATAGTGTCTATCATGATCTCGATCTTCTCGGATATGCATGGAGAATGTGGTGTGAAAAAACACCGTTGGAGCTGATAGACGAGTCTCTAAGCGATTTGATTGTTATAGAAGAACTAGAAATTATGAGATGTATTCAGACAGGGTTATTATGTGTTCAAGAGAGAGCTGATGATAGGCCATCTATGTCAGCTGCAGTTCTAATGTTGAATGGTGAGAAAACATTGCCAGAGCCAAAGGAACCAGCCTTTTATCCACACCAGTTTGGTTCTTCTTCAGGAACTAGTAATCTGCATTCGAACAATGAAGTTTCCATAACATTGTTACAAGCAAGATAG 2136 0.3717 MIWSSNKSTTAAKPSLQLLENGNLVVKDETKQDNILWQSFDFPGDTLLPGMRITSSLVNGDYKGLVSWTDTQDPSTGLYSYHIDTNGYPQVVIKKGNILVTRVGSWNGNSLSGFSSADLYKTFNITFVITEKEVSYGYELLDSSMVSRYLLNSAGQITRFSLSDDRKSWQIFFIGPIDRCDNYAKCGANSYCDADNSPICECLDGFIPKSREKWNSQNWTDGCVRRVKLDCDDNSDGFLKQVGVKLPDTSKSWFNKSMNLEECEGFCLRNCSCTGYANLDIRDGGSGCLVWFNNILDVKKLSSGGQDFYMRVAASELSAHTGLNKKKLAGILVGCIMFVAIMIILGVTIHRVRKKKLAKQGNNQVFSLNNLSNNNDNEDIDIPIFDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLVGCCIQNDEKLLIYEFMINRSLDYFIFDQTRKSLLHWTRRFQIIGGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRIVGTHGYISPEYATRGFFSVKSDVFSFGVIILETISGKKNREYSVYHDLDLLGYAWRMWCEKTPLELIDESLSDLIVIEELEIMRCIQTGLLCVQERADDRPSMSAAVLMLNGEKTLPEPKEPAFYPHQFGSSSGTSNLHSNNEVSITLLQAR 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06718 711 PIRSF SRK 1 711 IPR024171 GO:0004674
Vivi2g06718 711 Gene3D Transferase(Phosphotransferase) domain 1 473 679 - -
Vivi2g06718 711 CDD PAN_AP_plant 227 313 - -
Vivi2g06718 711 Gene3D - 1 102 IPR036426 -
Vivi2g06718 711 CDD STKc_IRAK 403 671 - -
Vivi2g06718 711 Pfam S-locus glycoprotein domain 102 210 IPR000858 GO:0048544
Vivi2g06718 711 SMART serkin_6 397 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06718 711 Pfam D-mannose binding lectin 1 68 IPR001480 -
Vivi2g06718 711 ProSiteProfiles PAN/Apple domain profile. 231 313 IPR003609 -
Vivi2g06718 711 Gene3D Phosphorylase Kinase; domain 1 370 472 - -
Vivi2g06718 711 Pfam PAN-like domain 231 298 IPR003609 -
Vivi2g06718 711 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 660 - -
Vivi2g06718 711 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 677 - -
Vivi2g06718 711 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 361 472 - -
Vivi2g06718 711 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 230 312 - -
Vivi2g06718 711 Pfam Protein tyrosine and serine/threonine kinase 398 598 IPR001245 GO:0004672|GO:0006468
Vivi2g06718 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Vivi2g06718 711 SUPERFAMILY Protein kinase-like (PK-like) 382 700 IPR011009 -
Vivi2g06718 711 Gene3D Hepatocyte Growth Factor 231 311 - -
Vivi2g06718 711 ProSiteProfiles Bulb-type lectin domain profile. 1 81 IPR001480 -
Vivi2g06718 711 SMART ntp_6 233 312 IPR003609 -
Vivi2g06718 711 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 74 IPR036426 -
Vivi2g06718 711 ProSiteProfiles Protein kinase domain profile. 397 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06718 Vivi-Chr2 205199070 205202147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06718 322 686 Receptor kinase-like Gene Family AT4G23190 49.330 1.28e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06718 PK_Tyr_Ser-Thr 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06718 - - vum:124842963 1037.33