Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06717 ATGGAAAGCTTCAAAGTGCTAGTTTATTGTTTTCTTCTCTTTCTCTTCATACCAACCTTCAATACCTTGGAAACCATTCTTCCAGGACAATCAATCAAAGGTAATGAGACTTTAATCTCTACAAATGGAACTTTTGAAGCAGGTTTCTTCAACTTTGATAGTTCTAATAACCAATATTTTGGTATATGGTACAAGGACATTTCACCAAGAACTGTTGTGTGGATAGCAAACCGAGATTCTCCATTGGAAAACTCATCAGGAGTTTTGAATGTTACTGAGAAAGGAACTCTAGTTATTGTTGATGATCCCAAAGGCGTTATGATATGGTCCTCTAACAAATCAACAACAGCTGCAAAACCAAGTTTGCAACTCTTGGAGAATGGAAACCTTGTTGTGAAAGATGAAACCAAACAAGATAATATTTTGTGGCAAAGTTTTGATTTTCCTGGTGACACTTTACTCCCAGGTATGAGAATCACAAGTAGTTTAGTAAATGGCGATTATAAAGGTTTGGTTTCGTGGACAGATACGCAAGATCCTTCTACTGGTTTGTATTCATATCATATAGATACTAATGGTTATCCTCAAGTAGTGATTAAGAAAGGAAACATATTAGTAACTAGAGTTGGTTCATGGAACGGAAATAGTTTATCAGGATTTTCTTCGGCGGATCTTTACAAAACCTTTAATATCACTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGAACTTCTGGACAGTTCAATGGTTTCAAGGTACTTGCTTAACTCGGCGGGACAAATAACACGTTTCTCGCTGTCTGATGATAGAAAAAGTTGGCAAATTTTCTTCATTGGCCCAATAGATCGGTGTGACAATTATGCTAAGTGTGGTGCAAATTCTTATTGTGATGCTGATAATTCTCCGATCTGTGAGTGTCTTGATGGTTTCATTCCGAAATCTCGAGAAAAATGGAATTCGCAAAATTGGACTGATGGTTGTGTTAGGAGAGTGAAGTTAGATTGTGATGATAATAGTGATGGTTTTTTGAAGCAAGTGGGGGTGAAGCTGCCAGATACATCAAAATCTTGGTTTAATAAAAGCATGAACCTTGAAGAATGTGAGGGATTCTGTTTAAGAAACTGTTCTTGCACAGGTTATGCAAATTTAGATATCAGAGATGGTGGAAGTGGTTGCTTGGTTTGGTTTAATAACATTTTGGATGTCAAAAAGCTAAGCTCTGGAGGACAAGACTTTTACATGAGAGTTGCAGCTTCTGAACTAAGTGCTCACACAGGTTTGAACAAGAAGAAGCTTGCAGGAATTCTAGTAGGCTGTATAATGTTTGTTGCGATCATGATAATACTTGGAGTCACCATACATCGCGTCCGGAAGAAGAAACTAGCGAAACAAGGGAATAATCAAGTATTCAGCTTGAATAATCTTTCCAACAATAATGATAATGAAGATATTGACATACCAATATTTGATTTATCAACCATAGCAAATGCAACTAATAACTTCTCCATTGATAACAAATTGGGGCAGGGAGGTTTTGGGCCGGTTTACAAGGGTAAATTGGAAAATGGACAAGATATAGCTGTGAAGAGACTTTGCAATACTTCAGGACAAGGACCAAAGGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCATAGAAATCTTGTTAAACTAGTTGGTTGTTGCATTCAAAATGATGAGAAACTCTTGATTTATGAATTCATGATCAACAGAAGCTTGGACTACTTCATTTTCGACCAAACTAGAAAGAGTTTACTGCATTGGACTCGACGGTTCCAAATTATCGGCGGTATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCAAGATTAAGAATTATTCACCGAGATCTCAAGACAAGCAATATTCTTCTAGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCTAAAGGTGAAACAAGAAGAATAGTAGGAACTCATGGTTACATATCTCCAGAGTATGCAACACGCGGATTTTTCTCAGTGAAGTCAGATGTATTTAGCTTTGGTGTTATTATACTAGAGACAATCAGTGGAAAAAAGAATAGAGAATATAGTGTCTATCATGATCTCGATCTTCTCGGATATGCATGGAGAATGTGGTGTGAAAAAACACCGTTGGAGCTGATAGACGAGTCTCTAAGCGATTTGATTGTTATAGAAGAACTAGAAATTATGAGATGTATTCAGACAGGGTTATTATGTGTTCAAGAGAGAGCTGATGATAGGCCATCTATGTCAGCTGCAGTTCTAATGTTGAATGGTGAGAAAACATTGCCAGAGCCAAAGGAACCAGCCTTTTATCCACACCAGTTTGGTTCTTCTTCAGGAACTAGTAATCTGCATTCGAACAATGAAGTTTCCATAACATTGTTACAAGCAAGATAG 2454 0.37 MESFKVLVYCFLLFLFIPTFNTLETILPGQSIKGNETLISTNGTFEAGFFNFDSSNNQYFGIWYKDISPRTVVWIANRDSPLENSSGVLNVTEKGTLVIVDDPKGVMIWSSNKSTTAAKPSLQLLENGNLVVKDETKQDNILWQSFDFPGDTLLPGMRITSSLVNGDYKGLVSWTDTQDPSTGLYSYHIDTNGYPQVVIKKGNILVTRVGSWNGNSLSGFSSADLYKTFNITFVITEKEVSYGYELLDSSMVSRYLLNSAGQITRFSLSDDRKSWQIFFIGPIDRCDNYAKCGANSYCDADNSPICECLDGFIPKSREKWNSQNWTDGCVRRVKLDCDDNSDGFLKQVGVKLPDTSKSWFNKSMNLEECEGFCLRNCSCTGYANLDIRDGGSGCLVWFNNILDVKKLSSGGQDFYMRVAASELSAHTGLNKKKLAGILVGCIMFVAIMIILGVTIHRVRKKKLAKQGNNQVFSLNNLSNNNDNEDIDIPIFDLSTIANATNNFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLVGCCIQNDEKLLIYEFMINRSLDYFIFDQTRKSLLHWTRRFQIIGGIARGLVYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGETRRIVGTHGYISPEYATRGFFSVKSDVFSFGVIILETISGKKNREYSVYHDLDLLGYAWRMWCEKTPLELIDESLSDLIVIEELEIMRCIQTGLLCVQERADDRPSMSAAVLMLNGEKTLPEPKEPAFYPHQFGSSSGTSNLHSNNEVSITLLQAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06717 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 418 - -
Vivi2g06717 817 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi2g06717 817 Pfam PAN-like domain 337 404 IPR003609 -
Vivi2g06717 817 CDD PAN_AP_plant 333 419 - -
Vivi2g06717 817 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Vivi2g06717 817 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Vivi2g06717 817 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Vivi2g06717 817 Pfam Protein tyrosine and serine/threonine kinase 504 704 IPR001245 GO:0004672|GO:0006468
Vivi2g06717 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 578 - -
Vivi2g06717 817 CDD B_lectin 30 149 IPR001480 -
Vivi2g06717 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 766 - -
Vivi2g06717 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 783 - -
Vivi2g06717 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Vivi2g06717 817 ProSiteProfiles Protein kinase domain profile. 503 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06717 817 CDD STKc_IRAK 509 777 - -
Vivi2g06717 817 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Vivi2g06717 817 SMART blect_4 29 149 IPR001480 -
Vivi2g06717 817 Gene3D Hepatocyte Growth Factor 337 417 - -
Vivi2g06717 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Vivi2g06717 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Vivi2g06717 817 SMART serkin_6 503 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06717 817 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Vivi2g06717 817 SUPERFAMILY Protein kinase-like (PK-like) 488 805 IPR011009 -
Vivi2g06717 817 SMART ntp_6 339 418 IPR003609 -
Vivi2g06717 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Vivi2g06717 817 Gene3D - 20 146 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06717 Vivi-Chr2 205198968 205202147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06717 428 792 Receptor kinase-like Gene Family AT4G23190 49.330 2.52e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06717 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06717 - - vum:124842963 1174.07