Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06716 ATGCATCTACACTCCAAATTGGAAAACCTTTTATCAGATGAAACTAGAAAAGGTTTAGTGCATTGGACTCGACGATTCCAAATTATCCGCGGGATTGCTCGAGGACTCGTTTATCTTCATGAAGATTCTAGATTAAGAATTATCCACCGAGATCTCAAGACAAATATTCTTCTAGACAAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGAGAGATGAAGCTAAAGGCGAAACAAGAAGTGTAGTAGGAACTCGTTTTGATGTTATTATACTAGAGAAAATCAGTGGAAAAGAGAACAGGGAATATAGTGACTATCACGATCTCAATCTTCTTGGATATAGCCTTGTTTATGTGGATGATTTGTTGATTGCAGGTAATAACATCCAGCTTATCAATCAAACCAAACAGCTTCTGCACCAACATTTTCATTTGAAAGACCTTGGGCCACGGAAGTACTTTTTGGGACTCGAAGTAGCTAGAAATTCAACAGGCATTCACATCAATCAAAGAAAATACACTCTTGATCTTCTCTCCACAGCTGGTCTTCTAGCCTGCAAACCAGCTAAGACACCAATGGCACGAGACACAAGACTGTCAGCACACAATGGCACAACCATGTCTGATCCTACCAAATGCAGAAGGCTTGTTGGTCAACTCATCTATATTTTCTCAACACTCGCCTAG 702 0.3917 MHLHSKLENLLSDETRKGLVHWTRRFQIIRGIARGLVYLHEDSRLRIIHRDLKTNILLDKNMNPKISDFGLARTLWRDEAKGETRSVVGTRFDVIILEKISGKENREYSDYHDLNLLGYSLVYVDDLLIAGNNIQLINQTKQLLHQHFHLKDLGPRKYFLGLEVARNSTGIHINQRKYTLDLLSTAGLLACKPAKTPMARDTRLSAHNGTTMSDPTKCRRLVGQLIYIFSTLA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06716 233 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 140 - -
Vivi2g06716 233 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 122 198 IPR013103 -
Vivi2g06716 233 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06716 233 Gene3D Transferase(Phosphotransferase) domain 1 2 121 - -
Vivi2g06716 233 FunFam Os07g0541700 protein 3 90 - -
Vivi2g06716 233 Pfam Protein kinase domain 6 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06716 233 SUPERFAMILY DNA/RNA polymerases 119 228 IPR043502 -
Vivi2g06716 233 SUPERFAMILY Protein kinase-like (PK-like) 7 91 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06716 Vivi-Chr2 205188193 205190079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06716 121 228 Receptor kinase-like Gene Family AT4G23160 51.852 1.37e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06716 RVT_2 5.5e-17 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06716 - - vvo:131651134 469.159