Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06707 ATGGATTTCGAACCAGAATTTCCCATTCCAACTAGGAAGGAAATGGAAGCCATAACAAAATACCTCGCCGTCGAATCAGATTTCATAGCCGCAGAAAACGTTTTCACAACCGGTCGCCACACTCTTCTTCGCAAGCATGCCGTTTCAATTATCGCTAAGCTCTCGAAGAGTATGGTTCCTGATGCATTTATTCCATATCTTGCTATGAACTATTTCGATCGTTTCGTTTCCAGACATAAAATGATCATGAAGGATGTCGAAGGTCTTACGGCTACTGTAAAAGTTCACTTGATTGCAATCGCTTGTCTCACCTTATCTGCCAAGATGAGGACAGCATACTTCTCAGTTAATCAGCTTCTGGAAAAACTATTATCGGACTTGAGAGTGAGTATAGGTTATCTGAAGGTAATGAGAATGGAGCTTATGATTCTTGATGAACTTCAATGGAAGATGCGATCTGTGACTGCTTTCTGCTTTCTGAACTACTATAATGCTTACTTCAAACGATTCTGTAGTTTTAAACGTCGTTGCATTAATGAGATCATAGTTCAAGCTCAAGGAGAGGTCACCTTCGTTCACTACTTGCCTTCTCACATTGCATTGTCTGCTTTTCTGGCTGCTGCCAAAATTGCATATCCTTCAAAGTTTAAGGAAATTGTACAACACATTGAGAGCAAAATTGGCCTTCAAAGGCGTGTGAAGGAATGTGTGAAGAAGATGGTTGATCTTTGCGTTAGATTGAACATTGAGATAGAGGCCCCCGGATCAGAAATTTGCTCCGCTTCAAGGAAAGTTGTGACGGGATCTGAAGAGGAAGCCAAAGAAGCTGGGATATCAAATATAAAGGAAATCCAACAAAGCAGCGGTGGGGGTGCAGTTGTGGTGGATTCATCTGAAGAGCGAGAGGAGACTCCGTTACTCAGGCGAAGATGTGACACGGGAAAGACAGAGACTTCTCATTTGCAGAAGGACGTGGAGGAGTTATCTGATAAAACAGATGTGGCAGCAAAAGAGATTGAAGCGGAAAAGCGAAGATTGATCAAGGGCAAAACAGTGGATGTGACTGAAACATGTGATGATGATAGAGCCAGGGTTGAGGCTATAATTCAACGAGCAGTGGAAAAGGGTGCGAAGGCACAGGCACAACCACGGATGGAGGGATATATATCAGATATTATAGAGCTTGCTGATCAACCAAAGAGGCCAATGAACTTTGAGCTGAAGTGGCCCATTGATGTTCCATCACTAGAGCTAGAAGAAGAAATAGAAGACGCGCGGCTGCAAGAGTCCACAATCATAAGCCTTAAAATACCAGGGACTAGAAGGAATAAAACTGAAGGAATGGGTTTAGAAGGGAATTGGAGTTTTGCAACTAAACCCTTTGACGGCGTCGGCGGACCAGAGCTTCAAAATACCATTTGA 1422 0.4304 MDFEPEFPIPTRKEMEAITKYLAVESDFIAAENVFTTGRHTLLRKHAVSIIAKLSKSMVPDAFIPYLAMNYFDRFVSRHKMIMKDVEGLTATVKVHLIAIACLTLSAKMRTAYFSVNQLLEKLLSDLRVSIGYLKVMRMELMILDELQWKMRSVTAFCFLNYYNAYFKRFCSFKRRCINEIIVQAQGEVTFVHYLPSHIALSAFLAAAKIAYPSKFKEIVQHIESKIGLQRRVKECVKKMVDLCVRLNIEIEAPGSEICSASRKVVTGSEEEAKEAGISNIKEIQQSSGGGAVVVDSSEEREETPLLRRRCDTGKTETSHLQKDVEELSDKTDVAAKEIEAEKRRLIKGKTVDVTETCDDDRARVEAIIQRAVEKGAKAQAQPRMEGYISDIIELADQPKRPMNFELKWPIDVPSLELEEEIEDARLQESTIISLKIPGTRRNKTEGMGLEGNWSFATKPFDGVGGPELQNTI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06707 473 Gene3D - 25 240 - -
Vivi2g06707 473 SUPERFAMILY Cyclin-like 136 249 IPR036915 -
Vivi2g06707 473 Gene3D - 31 152 - -
Vivi2g06707 473 Pfam Cyclin, C-terminal domain 154 245 IPR004367 -
Vivi2g06707 473 Pfam Cyclin, N-terminal domain 20 151 IPR006671 -
Vivi2g06707 473 SUPERFAMILY Cyclin-like 27 151 IPR036915 -
Vivi2g06707 473 Coils Coil 325 345 - -
Vivi2g06707 473 PANTHER CYCLINS 44 247 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06707 Vivi-Chr2 204902802 204905479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06707 44 209 Core Cell Cycle Gene Families AT1G70210 33.143 4.31e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06707 - K18812 vvo:131651129 901.353