Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06705 ATGGATTCCGAATCAGAGTTCCCCGTTCCTAATCGGAAGGAATCCGAACGCATAAAGGAGTACTTTCAAACTGAATCTCAATTCATGGCTGATAGGGGCTACTACGCACCGTTCAAGAACATTTGCTTACGGAAGCGTGCTGTTGCAGTAATCGACATGGTCTGGAGGATTATTTCTTCTGATACGTATATTCCGTATCTTGCTATGAACTATTTTGATCGTCTTGTTTCAAGATACAAAGGGATCTTGACGGATCCTGCCGTGGAAGGTCGCAATGATGCTGAAAAACTTCGATTGTTCACAATCTGTTGTCTCATCTTAGCCGCCAAGATGAGGATAAATAACTTCTCTGTTGATCGGTTTTTGAGAGCCTTGGAAGCCTTGAAAGCCATGAAAGAGGTTATAACTCATCAGATGGTAAAGAAAGCGGAGTATCTCATTCTTGATGCAATTCATTGGAAATTGCTACCGGTGACTGCCTTCTGCTTTCTGAACCACTATTACCCTTACTTCAAAGAATTCGGGGGTTTTAAACGTCGTTGCATCAATGAGATCATAGTTCAAGCTCAGGGAGAGATCACATTTGTTGAGTACACGCCTTCTCAGATTGCATTGTCCGCGTTTCTGGCTGCTTCCAAAATGGCATACCCCTCAAAATATGACAAAATACAAAATCCTTCTAACTTTCACAAATTTGACAATGAAGAGGAGGTGAAGAAATGTGTGAATCACATGATAAAGCTTTGCAATAGATTGGACATCGATATTGAGCCTGCTGAATCAGGAATTGGCTCTTCTTGTAGTATAGTTGTGCTAAGACCCCGAGAGGAAACCAAAGAAGTTGGAACTTCAAAGGTAAAGGAAATCCAACAAAGAAATAGCATGGCTGTGGTGGGGGATTCAAGCAACAGCAAGGCGCCGGTGGTGATTTCATGTGAGGAAAAAGAAAAAGAAGATGGGATTGCAGTAATCAACGGGGTTGGAACTTCAACGGTAAAGGAAATCCAACATGGCAATAGCAAGGCGGTTGTGGTGGGTTCAAGTGAAGAAAAAGAAAAAGAAAATGGGACTGTGATAATCAATGGGGTTGGAACTTCAAAGGAAAAGGAAATCCAACAAGGCATTGGCAAGGGTCTGGTGGTGGGTTCAAGTGAAGAAAAAGAAAAAGAAGATGGGACTGTGATAATCAACGGGGTTGGAACTTCAAAGGTAAAGGAAATCCAACAAGGCAATGGCAAGGGTGTGGTGGTGAATTTCTGTGAAGAAGAAAATGAAGATGAAGAAGTCAGAACTGCGTTAATCCAGCGAAGTCAAGTCATGCGCAACACAGATCCTTCTCAGGTGCCGGTGCTCATGCAGGTGGATGTGATCCAACGCCCAATAGATGATATAGACAGGGTTGAGGCTATAATCCGACGATCACTGGAAAAGCGTAAGGCAGTAGAGGCTGAAGAGCCACAGCTACAGATGGGTGGATCAAGTTCAGATATTGTAGATCATGTTGAACCAATGAACTTTGAGCTGAAGTGGATGGCTGGAGCAAAGGCATCAGCACGTCCTTAA 1563 0.4319 MDSESEFPVPNRKESERIKEYFQTESQFMADRGYYAPFKNICLRKRAVAVIDMVWRIISSDTYIPYLAMNYFDRLVSRYKGILTDPAVEGRNDAEKLRLFTICCLILAAKMRINNFSVDRFLRALEALKAMKEVITHQMVKKAEYLILDAIHWKLLPVTAFCFLNHYYPYFKEFGGFKRRCINEIIVQAQGEITFVEYTPSQIALSAFLAASKMAYPSKYDKIQNPSNFHKFDNEEEVKKCVNHMIKLCNRLDIDIEPAESGIGSSCSIVVLRPREETKEVGTSKVKEIQQRNSMAVVGDSSNSKAPVVISCEEKEKEDGIAVINGVGTSTVKEIQHGNSKAVVVGSSEEKEKENGTVIINGVGTSKEKEIQQGIGKGLVVGSSEEKEKEDGTVIINGVGTSKVKEIQQGNGKGVVVNFCEEENEDEEVRTALIQRSQVMRNTDPSQVPVLMQVDVIQRPIDDIDRVEAIIRRSLEKRKAVEAEEPQLQMGGSSSDIVDHVEPMNFELKWMAGAKASARP 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06705 520 PANTHER CYCLINS 34 247 IPR039361 -
Vivi2g06705 520 CDD CYCLIN_AtCycD-like_rpt2 158 245 - -
Vivi2g06705 520 Gene3D - 63 156 - -
Vivi2g06705 520 Pfam Cyclin, N-terminal domain 21 155 IPR006671 -
Vivi2g06705 520 Coils Coil 464 484 - -
Vivi2g06705 520 SUPERFAMILY Cyclin-like 16 155 IPR036915 -
Vivi2g06705 520 Pfam Cyclin, C-terminal domain 159 251 IPR004367 -
Vivi2g06705 520 Gene3D - 157 249 - -
Vivi2g06705 520 SMART Cyclin_C_2 158 272 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06705 Vivi-Chr2 204878983 204881705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06705 22 241 Core Cell Cycle Gene Families AT4G03270 28.139 4.85e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06705 - K18812 vvo:131648022 1003.43