Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06676 ATGGTGATGGTGATGAGGGTGAAACTTGTTTTGGTTGTTGTTACTGTTATTGCAATTTTGGTGAATGTGTCATTTGCCTTATACACACCTCATGATAATTATTTAATTGCTTGTGGTTCATCTAAAAGAATTAGCTTTCAAGATCGTGATTTTGTTCCGGATTCGGAGCATTCTGTACTAGTGGTAAAGACTGGGAATTCGGTTGTTGTTGGTAATTCAAATTCGAGTGATGTTCCGTCTCCAATTTATGGATCGGCTCGAGTTTTCAGTGATAAAGGTTCTTATAGATTTGGAGTTCAACCAGGTAGGCATTGGATTAGGTTATATTTTTATCCTATTCCAAATGCTAGTCATGATTTGACTTCAGCTTCTGTAACAGTTGTTAGTGATGATTTTGTTTTGTTGAGGAACTTCAGTTTTAGAAACTATAGTGGTTCTTATTTGTTTAGAGAGTATGCTGTTAATGTAACTTCTGATAGTTTGACTGTAACGTTCATTCCTTCGAATGGTTCGGTTGCTTTTGTGAACGCGATTGAAGTTGTGTCAATGCCGGATGATTTGTTTGTTGATCAGGCATTGGCGCTTAGCCCGTTAGCGCCTTTTAATGGCCTTTCGGAACTTGCTTTCGAGACTGTTTACCGTTTGAATATAGGAGGTTCCTTGTTAACTGCCGAAAACGACACGTTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCCATGTGAACAGTTCGGTCACTAATGTATCGACTAACCCTTCGAGCATTAGGTATCGACCGGGTGTTACATCTGAGACGGCGCCTAATTGGGTCTATGCGACTGCTGAAGCAATGGGGGATGCGAATGTTGCCAATTCGAATTTCAACATTACTTGGAGTTTTAATGTGGATCCGGATTTCTCCTATTTTGTTCGGCTGCACTTTTGCGATATTATTAGTAAGGCGATGAACACGTTAGTGTTCAATGTGTTCATAAATACGGATATAGCTATTGGAAGCCTCGATCTATCATCTATGACTAATGATTTGGCTTTGCCTTACTATAAGGACTTTGTTTCTAATGCATCGGATAGTACTTTGACGGTAAGTGTCGGTCCTGATACGATGGCAGACATTACAAATGCAACGATGAACGGATTGGAGATAATGAAAATTAGCAATTCATGGAAGAGCTTGGATGGACTTTCTTCGGTTTCGAGTCTCCTTCCTAATTCAAAATCAAAAAAGAACAAGATAGGAATAATTGTTGGTTCCGCCGCTGGTGCTTTCGTTGCCTTAGCTTTTGTTGGTTTGAGTTTTTGCTTGTTGGTTAGAAGAAAGTCGAAGTCTCCTCAAGAGGGTGGTCATTCATGGCTGCCATTGCCCTTATATGGAAATTCTCAGACCATGACGAAAATGTCAACAACTTCACAGAAGAGCGGAGGAACTGCAAGCTTCATTTCTTCGACAAATCTTGGACGGTTCTTCACTTTCCAAGAAATACTAGACGCAACCAACAAATTCGACGAGAAGCTTCTTCTCGGAGTTGGTGGTTTCGGCAGGGTTTATCAAGGAAGCCTTGATGATGGTACCAATGTAGCTGTTAAAAGAGGAAATCCTCGATCCGAACAAGGTCTTGCTGAATTCCGAACCGAAATTGAGATGTTATCCAAGCTTCGCCATCGCCATCTTGTGTCTCTAATTGGGTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAATGGTCCCCTCAGGAGTCATTTGTATGGAACAGACCTACCACCTCTATCATGGAAACAAAGACTCGAAATTTGCATCGGCGCAGCAAGAGGCCTTCATTATCTCCACACCGGTGCATCACAAAGTATTATTCACCGAGATGTAAAGACAACAAACATCCTTTTAGACGATAGCTTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCCAAAACCGGCCCTGCACTCGATCAAACTCACGTGAGCACGGCCGTTAAAGGTAGTTTCGGTTATCTTGATCCAGAATACTTTAGACGACAACAACTCACAGAGAAATCCGATGTTTATTCCTTCGGAGTAGTTTTAATGGAAGTGCTATGCACAAGACCGGCTTTGAACCCTGTCCTTCCTAGGGAGCAGGTCAATATAGCCGAGTGGGCAATGAACTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAACAACTTGTCGGGAAGGTCAATCCTGCTTCGCTTAAGAAGTTTGGGGAGACAGCCGAGAAGTGTTTGGCCGAGTATGGAGTGGATAGACCATCAATGGGAGATGTTTTATGGAACCTCGAATACGCTTTGCAGCTACAAGAAACCTCGTCAGCACTCAGGGAACCTGAGGATAACAGCACAAACCACATAACCGGGATTCAGTTGACACCACTTGAGAATTTTGATAACAGTGTGAGTATGATTGATGGAAGCAACTCCGTCACAGACGATGATGGTGAAGACGCTGCCACGAGTGCAGTCTTCTCGCAATTGGTAAATCCACGTGGAAGATGA 2529 0.4239 MVMVMRVKLVLVVVTVIAILVNVSFALYTPHDNYLIACGSSKRISFQDRDFVPDSEHSVLVVKTGNSVVVGNSNSSDVPSPIYGSARVFSDKGSYRFGVQPGRHWIRLYFYPIPNASHDLTSASVTVVSDDFVLLRNFSFRNYSGSYLFREYAVNVTSDSLTVTFIPSNGSVAFVNAIEVVSMPDDLFVDQALALSPLAPFNGLSELAFETVYRLNIGGSLLTAENDTLGRTWENDQKYLHVNSSVTNVSTNPSSIRYRPGVTSETAPNWVYATAEAMGDANVANSNFNITWSFNVDPDFSYFVRLHFCDIISKAMNTLVFNVFINTDIAIGSLDLSSMTNDLALPYYKDFVSNASDSTLTVSVGPDTMADITNATMNGLEIMKISNSWKSLDGLSSVSSLLPNSKSKKNKIGIIVGSAAGAFVALAFVGLSFCLLVRRKSKSPQEGGHSWLPLPLYGNSQTMTKMSTTSQKSGGTASFISSTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYQGSLDDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDSFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDQQLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALREPEDNSTNHITGIQLTPLENFDNSVSMIDGSNSVTDDDGEDAATSAVFSQLVNPRGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06676 842 Gene3D - 33 184 - -
Vivi2g06676 842 Gene3D - 207 387 - -
Vivi2g06676 842 SMART serkin_6 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06676 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi2g06676 842 FunFam Putative receptor-like protein kinase 33 184 - -
Vivi2g06676 842 PANTHER OS07G0166700 PROTEIN 487 778 IPR045272 GO:0004714|GO:0006468
Vivi2g06676 842 Gene3D Transferase(Phosphotransferase) domain 1 577 796 - -
Vivi2g06676 842 Pfam Malectin-like domain 36 385 IPR024788 -
Vivi2g06676 842 SUPERFAMILY Protein kinase-like (PK-like) 478 772 IPR011009 -
Vivi2g06676 842 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Vivi2g06676 842 FunFam Receptor-like protein kinase FERONIA 577 793 - -
Vivi2g06676 842 FunFam receptor-like protein kinase FERONIA 462 576 - -
Vivi2g06676 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Vivi2g06676 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06676 842 CDD STKc_IRAK 507 772 - -
Vivi2g06676 842 Pfam Protein tyrosine and serine/threonine kinase 506 767 IPR001245 GO:0004672|GO:0006468
Vivi2g06676 842 FunFam Receptor-like protein kinase FERONIA 208 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06676 Vivi-Chr2 204453912 204457492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06676 26 782 Receptor kinase-like Gene Family AT2G21480 54.522 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi2g06676 Malectin_like 3.4e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06676 - - gmx:100809700 1319.68