Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06671 ATGCAGAAGGATATTCGTAGAATCATTGATAAGGACGGCGATGTTGTTGTTATTGCAAATCTCAGTGACAATACTTGGAGATTCTATGATAACAACAACTCTTTGTTATGGCAATTCATTTTCACTTTTGTTGCAGGTATAAATTCAAGTTGGATTGCAGTTTTAGGAAGTGACGGTGTCATTACTTTCTCAAATCTCAACGGTGGTGGATCAAATGGTGGTTCTTCAACAAGAATACCACAAGATCCTTGTCAAACACCAGAGCCTTGTGAACCTTACAACATATGCACAAATAGTGGTAAGTGTAGCTGTCCTTCTGTTCTTCTTCCTAGTTGTAAACCAGGTTTTGTTTCTCCTTGTGGTGATGATAAATCAGAAAAGTCTATTGAACTTCTGAAAGCTGATGATGGACTTAGTTACTTCGCGCTCGATTTTCTTCCGCCCTATTCGAATACCGATTTGGCCGGTTGTCAAACATCTTGCCGTGGAAATTGCTCTTGTCTTGCAATGTTCTTCCATACAAGTTCAGGGAACTGTTTCTTGTTGGACAGTGTTGGAAGTTTTCAGAAATTCAATGATTCTGATTCTGGTTATGTTTCTTACATTAAGGTTGTCTCAAGTGATGAAAGTGGAACCAGAAATAAGCACATCATCATAGGTGTTGTGGTTGCTGTCATATTAACTTTGGTTGTAATTCTGCTCTTTGTCGTGGTTCGATACTACAAGAAAAAGAAAAATTTAGCTCGAGAGAATTCAGATGAAGACGATTTCTTGGAGAATTTAACCGGTATGCCAATCCGTTTCCGCTATAAAGATCTTGAAGTTGCAACTGATAACTTCTCTTTGAAGCTTGGTCAAGGAGGTTTTGGATCAGTTTACAAAGGAGTTCTACCTGATGGAACTTATTTAGCTGTGAAGAAGCTAGAAGGTATTGGTCAAGGGAAAAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGTAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGATTTTGTGCAGATGGAACTCATAGACTTCTAGTTTATGAGTATATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAGAAAAGCGAATTTATTTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAACAGCAAAAGGACTTGCTTATCTGCATCAAGAGTGTGACTCAAAGATTGTTCATTGTGACATTAAGCCTCAAAATGTACTTTTGGATGATCAATTCACTGCAAAAGTTTCAGATTTTGGTTTAGCTAAGCTAATAAATAGAGAACAAAGCCATGTTTTCACAACGCTGAGAGGAACACGTGGCTACCTCGCACCTGAGTGGATAAAAAACTATGCTATATCAGAGAAAAGTGATGTATACAGTTATGGGATGGTGTTGCTAGAGATAATTGGTGGAAGGAAGAACTATGATCCTAACGAGACTTTAGAGAAATCCTATTTTCCTCTGTATGCTTTTAAGATGATGGATGAAGGGAATCTAAAGGATATCATTGATTCAGAGTTGAAAATGGATGAGGAGTGTGATGATAGGGTTCATTGTGCTATAAGTGTTGCATTGTGGTGCATACAAGAAGACATGTCTATGAGACCTTCCATGACAAAAGTTGTGCAAATGTTAGAGGGTGTTTGCAATGTTCCTAAGCCACCAAAATCCTCCAATGAAGGAGACACATCTTCTGATGCTTATCTATCAGGAATTAGTCTATCAGGTCCAAGATAA 1749 0.3779 MQKDIRRIIDKDGDVVVIANLSDNTWRFYDNNNSLLWQFIFTFVAGINSSWIAVLGSDGVITFSNLNGGGSNGGSSTRIPQDPCQTPEPCEPYNICTNSGKCSCPSVLLPSCKPGFVSPCGDDKSEKSIELLKADDGLSYFALDFLPPYSNTDLAGCQTSCRGNCSCLAMFFHTSSGNCFLLDSVGSFQKFNDSDSGYVSYIKVVSSDESGTRNKHIIIGVVVAVILTLVVILLFVVVRYYKKKKNLARENSDEDDFLENLTGMPIRFRYKDLEVATDNFSLKLGQGGFGSVYKGVLPDGTYLAVKKLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSEFILDWDTRFNIALGTAKGLAYLHQECDSKIVHCDIKPQNVLLDDQFTAKVSDFGLAKLINREQSHVFTTLRGTRGYLAPEWIKNYAISEKSDVYSYGMVLLEIIGGRKNYDPNETLEKSYFPLYAFKMMDEGNLKDIIDSELKMDEECDDRVHCAISVALWCIQEDMSMRPSMTKVVQMLEGVCNVPKPPKSSNEGDTSSDAYLSGISLSGPR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06671 582 MobiDBLite consensus disorder prediction 556 582 - -
Vivi2g06671 582 FunFam serine/threonine-protein kinase PBS1-like 246 352 - -
Vivi2g06671 582 FunFam S-receptor-like kinase 5 353 558 - -
Vivi2g06671 582 SMART serkin_6 278 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06671 582 Gene3D Phosphorylase Kinase; domain 1 240 352 - -
Vivi2g06671 582 SUPERFAMILY Protein kinase-like (PK-like) 261 550 IPR011009 -
Vivi2g06671 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Vivi2g06671 582 Pfam Protein kinase domain 283 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06671 582 CDD STKc_IRAK 284 551 - -
Vivi2g06671 582 MobiDBLite consensus disorder prediction 560 582 - -
Vivi2g06671 582 ProSiteProfiles Protein kinase domain profile. 278 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06671 582 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 20 561 - -
Vivi2g06671 582 Gene3D Transferase(Phosphotransferase) domain 1 353 570 - -
Vivi2g06671 582 ProSitePatterns Protein kinases ATP-binding region signature. 284 307 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06671 Vivi-Chr2 204234753 204236664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06671 216 561 Receptor kinase-like Gene Family AT5G20050 46.594 3.20e-101 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi2g06671 Pkinase 7.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06671 - - vvo:131648005 1150.19