Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06666 ATGGAAAGTACCGATTCGTCGACGGGTTCGCAGCAGCCGAATCTCCCGCCGGGGTTCCGGTTTCACCCTACTGATGAAGAGCTTGTTGTTCATTATCTCAAGAAAAAAGCAGCTTCTGCTCCTTTGCCTGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGGGAGCAAGAGTGGTATTTCTTTAGTCCGAGGGACAGGAAGTATCCGAATGGGGCGAGGCCAAACAGGGCAGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCGGTTTTGACTTCTGGAGGAACGCAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGCGGAAAACCACCAAGAGGAATCAAAACCAACTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTTAGGCTTGATGATTGGGTTTTGTGTCGGATCTACAAGAAAAGCAACACGCATCGATCACCGGTGGAACACGATAGGGACGATTCAATAGAAGACATGATAGGCGGAGTACATCCGTCGATCAACGTGGGTCAAATGAACGCGGCATCAAGGTTTCATCATTTTTCAAAGATGTCATCAAGTAGTTACAACAATACATTGTTGGAGAATGATCAAAATTTATTAGAAGGAATGATGATGAACAACAATAATCTAGGAGGAGGTTCAAATTCCAAGGGTGGAGAGTTATCTTTTGTGCCAACCATGACAACATCTTCAAATGCAAATTCACCTTCCAAAAGAACACTTTCTTCTCTCTACAATTGGAATGATCATGAAGATGTTGCAGCAGCAGGTCAAGTTGGTAGTTCATCATCAAACAAAAGGTTCAATTTAGAAAGTGTGGTGAGAAATGATCATCAAGAGAATGGTACTACTTCTTTTGCTTCTCTCCTTAATAATCTCCCTCAAACATCTTCATTGCATCAACAACAACAACAACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGCATGAATTGGTATGGATAA 1083 0.422 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDRDDSIEDMIGGVHPSINVGQMNAASRFHHFSKMSSSSYNNTLLENDQNLLEGMMMNNNNLGGGSNSKGGELSFVPTMTTSSNANSPSKRTLSSLYNWNDHEDVAAAGQVGSSSSNKRFNLESVVRNDHQENGTTSFASLLNNLPQTSSLHQQQQQQTMLGSIPYQIQGMNWYG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06666 360 FunFam NAC transcription factor 56 24 181 - -
Vivi2g06666 360 MobiDBLite consensus disorder prediction 1 20 - -
Vivi2g06666 360 MobiDBLite consensus disorder prediction 1 17 - -
Vivi2g06666 360 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Vivi2g06666 360 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Vivi2g06666 360 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Vivi2g06666 360 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Vivi2g06666 360 PANTHER NAC TRANSCRIPTION FACTOR 56 15 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06666 Vivi-Chr2 204092154 204094348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06666 1 359 NAC Transcription Factor Family AT3G15510 53.158 9.93e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi2g06666 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06666 - - gmx:100170710 521.546