Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06581 ATGCAACGAGCAAGTGATCTTCTTCTCGGCGTTTCAATGTTCGCCGAGCCCGTCAGCATTAAAATCTTCGATCGCGCTAATTCAGCTATGAATGAATTGTGCAATATCGGAATTAGAGGTAAACCTTTATGGCATCAACATAAACCAGATCGATACGAAACTCTTAACAATATTGAATATTTGAAATATTCTGGCCGTGTTGATGCGGCTTTAATGGATATTGTTAAATTGGCTGAGGTCGGAGAATTTCAAGCTTTACCTAGCTTTGATTTGTACGGAAATCCAATCAATTCAACGTCAAATGAAAATTCCGTACAAGGTTTACGGATGGAAGCTTCCCGAGATACATCAATGATTAACGCCGGTCCGTTAGACATTGTTGAATTACTTATGAATGTGAATCAATGGTGGATGACATTTCACAAAATTGTTTCAAGAGCTACGATTCTTGGAAGCTTTATGAATAGTGTAGAAGGAAGCTATGATGGGAAATTGCATGTGCTGAATGCGGAATTTCATTTACCTAGTCCTGTTGTACCGACTCGAGAGTGTTGTTTTGCAAGATACTGCAAACAATTCTCTCCGAACGACTGGGTTGTTGTTGATGTATCTTTGGAGGATATTTTCCCTTATCCATCTAACAATTTTCGAAGAAGACCTTCCGGTTGTTTGATCAAAGGAATGCCTAATGGATGCTCTAAGGTTACATGGGTGGAGCATGTGGAAGCTGATCATAGCCAATTGAATGATCTTTTCAAGCCATTAGTTACCTCTGGTTTGTCTTTTGGTGCAACGCGGTGGCTAGCTTCCATTGTTCGACACTTTGACTGGTCTAAAACACTTGAGGCTACACAATTTTATTCAGATGGGAAGGTTTTTATACCTCAAAGGGGAAGGGCTAGTTTATTGAAACTGGCTGATAGAATGATGAGAAAATTTTGCGCAAATCTTAGCGCAACAACTACCAATCCATGGATGCGACTCGCTCCATTTCCCGGTTCAACCGATATTAGAGTTATGATTCCGAATAATATGCCTAGTACTTCAAGTAATCCCGTTGGAACAACGATCGTTTTTAGTACTACTATTTGGCTTAATATCTCCCCGAATCGATTATTCAACTTCCTTCGCCACGAGAAATCCAGAAACAAGTGGGATATACTTTCACAATCCCTTTCAATTCAACAATTCGCATGCATGACCGTCGGCGAACATCTAGAGAATCGCGTTTCTTTGCTGCGAGCAAGTAACTCCGAGGACAAGACTGAAATCTTTTACCTGCAAGAGAGTTACGCAGACGAAGCAGCTTCCTATGTGATTTATGCTCCGCTAGACGAATCAGCATTGATTCATCTCGCGAAAGGATCCAACCCGGACAATGTAATTGCATTTCCTTCGGGGTTCGCTATAATTCCGGGAGGGTTACCCAAAAAAGGCGATAATCCGGGAGGGTTACCCAAAAAAGGCGATAATCCGGGAGGGTTACCCAAAAAAGGCGATAAGGGAAATAGTACTGCTAGTAACGAAAGTCTTCTTACTATATCTTTTAATCTGATTGACAAAGCTAGCATTATTACAAGTATCCCTCCTGAATCTGTTCAAACTATCTATGGGATCATTACAGAAACTGTTACGGCTATTAAGGACGCGTTATCGTGTCATAGTCAACTCAACAATTGGGTGCAAGATGAGTTGAAAAATGGCGCGGGAAAGAAGTAG 1719 0.4107 MQRASDLLLGVSMFAEPVSIKIFDRANSAMNELCNIGIRGKPLWHQHKPDRYETLNNIEYLKYSGRVDAALMDIVKLAEVGEFQALPSFDLYGNPINSTSNENSVQGLRMEASRDTSMINAGPLDIVELLMNVNQWWMTFHKIVSRATILGSFMNSVEGSYDGKLHVLNAEFHLPSPVVPTRECCFARYCKQFSPNDWVVVDVSLEDIFPYPSNNFRRRPSGCLIKGMPNGCSKVTWVEHVEADHSQLNDLFKPLVTSGLSFGATRWLASIVRHFDWSKTLEATQFYSDGKVFIPQRGRASLLKLADRMMRKFCANLSATTTNPWMRLAPFPGSTDIRVMIPNNMPSTSSNPVGTTIVFSTTIWLNISPNRLFNFLRHEKSRNKWDILSQSLSIQQFACMTVGEHLENRVSLLRASNSEDKTEIFYLQESYADEAASYVIYAPLDESALIHLAKGSNPDNVIAFPSGFAIIPGGLPKKGDNPGGLPKKGDNPGGLPKKGDKGNSTASNESLLTISFNLIDKASIITSIPPESVQTIYGIITETVTAIKDALSCHSQLNNWVQDELKNGAGKK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06581 572 CDD START_ArGLABRA2_like 22 274 - -
Vivi2g06581 572 Gene3D - 98 264 IPR023393 -
Vivi2g06581 572 MobiDBLite consensus disorder prediction 475 506 - -
Vivi2g06581 572 SUPERFAMILY Bet v1-like 105 275 - -
Vivi2g06581 572 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 21 551 IPR042160 -
Vivi2g06581 572 SMART START_1 62 277 IPR002913 GO:0008289
Vivi2g06581 572 Pfam START domain 100 271 IPR002913 GO:0008289
Vivi2g06581 572 SUPERFAMILY Bet v1-like 298 472 - -
Vivi2g06581 572 ProSiteProfiles START domain profile. 15 280 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06581 Vivi-Chr2 201950402 201953192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06581 1 553 Homeobox Transcription Factor Family AT4G04890 38.198 8.72e-112 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06581 K09338 - jre:108992281 466.848