Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g06571 | ATGACTGCTATTGCTGAATGTGCTAATAAATTCAAACACAAAGTTTTCCCCGTTTTCTATCATATTGATCCATCGGATGTACGGAAACAAAGTGGACCTTACCAAAAAGCTTTTCTTTTACACACGAAGAAATTCAAAGATGATTTAGACAAGGTTAGGAGATGGAGGAGAGCTATGATTCGTTTGACTGCGTTAGTTGGTTGGCATGTCAAGGACATGCCGGAGTTTGAAGTGGTTGAAAGTGTTGTTCAGGAAGTGATAAAAACATTAGGTCATAAATTATCTGGATTTGATGACCTTGTTGGGATTGAACCTCGAGTAGAAGCATTGAAAGTTCTTTTAAAATTAGGCTCAAAGAATGATGAATTTCGGGTTATAGGAATTAAAGGGATGGGCGGAATAGGCAAGACGACACTTGCTAATGTCTTGTATGATAGAATATCTTGTATGTTTGATGCTTGTTGTTTCATTGAGAATGTAAGCAAAACTTATAAAGACGGCGGTGCCATTGCTATTCAGAAACAAATCCTTTGTCAAGCCTTCAATGAGATAAATCTAGAGAGATATAGTCCTTCTGAAGTATCTGCGATTATAGGAAATAGACTTGGCAACATAAATGTGCTCATAGTTCTCGACAATGTCGATGGATTAAAGCAAGTACAAGAGCTGGCAATTGATCCCAAACTTCTTCACCCAGAAAGTAGAATGATCACTACAACTAGGGATGCACAATACATATTCTAA | 744 | 0.3737 | MTAIAECANKFKHKVFPVFYHIDPSDVRKQSGPYQKAFLLHTKKFKDDLDKVRRWRRAMIRLTALVGWHVKDMPEFEVVESVVQEVIKTLGHKLSGFDDLVGIEPRVEALKVLLKLGSKNDEFRVIGIKGMGGIGKTTLANVLYDRISCMFDACCFIENVSKTYKDGGAIAIQKQILCQAFNEINLERYSPSEVSAIIGNRLGNINVLIVLDNVDGLKQVQELAIDPKLLHPESRMITTTRDAQYIF | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g06571 | 247 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 3 | 68 | IPR035897 | - | |
Vivi2g06571 | 247 | ProSiteProfiles | TIR domain profile. | 1 | 90 | IPR000157 | GO:0007165 | |
Vivi2g06571 | 247 | Pfam | TIR domain | 3 | 94 | IPR000157 | GO:0007165 | |
Vivi2g06571 | 247 | Gene3D | - | 1 | 93 | IPR035897 | - | |
Vivi2g06571 | 247 | PRINTS | Disease resistance protein signature | 201 | 215 | - | - | |
Vivi2g06571 | 247 | PRINTS | Disease resistance protein signature | 125 | 140 | - | - | |
Vivi2g06571 | 247 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 95 | 245 | IPR027417 | - | |
Vivi2g06571 | 247 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 7 | 244 | IPR044974 | GO:0006952 | |
Vivi2g06571 | 247 | Gene3D | - | 94 | 246 | IPR027417 | - | |
Vivi2g06571 | 247 | Pfam | NB-ARC domain | 113 | 243 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g06571 | Vivi-Chr2 | 201851540 | 201852950 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g06571 | 15 | 242 | WRKY Transcription Factor Family | AT4G12020 | 27.074 | 2.97e-21 | 90.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g06571 | - | - | vvo:131643801 | 306.99 |