Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06571 ATGACTGCTATTGCTGAATGTGCTAATAAATTCAAACACAAAGTTTTCCCCGTTTTCTATCATATTGATCCATCGGATGTACGGAAACAAAGTGGACCTTACCAAAAAGCTTTTCTTTTACACACGAAGAAATTCAAAGATGATTTAGACAAGGTTAGGAGATGGAGGAGAGCTATGATTCGTTTGACTGCGTTAGTTGGTTGGCATGTCAAGGACATGCCGGAGTTTGAAGTGGTTGAAAGTGTTGTTCAGGAAGTGATAAAAACATTAGGTCATAAATTATCTGGATTTGATGACCTTGTTGGGATTGAACCTCGAGTAGAAGCATTGAAAGTTCTTTTAAAATTAGGCTCAAAGAATGATGAATTTCGGGTTATAGGAATTAAAGGGATGGGCGGAATAGGCAAGACGACACTTGCTAATGTCTTGTATGATAGAATATCTTGTATGTTTGATGCTTGTTGTTTCATTGAGAATGTAAGCAAAACTTATAAAGACGGCGGTGCCATTGCTATTCAGAAACAAATCCTTTGTCAAGCCTTCAATGAGATAAATCTAGAGAGATATAGTCCTTCTGAAGTATCTGCGATTATAGGAAATAGACTTGGCAACATAAATGTGCTCATAGTTCTCGACAATGTCGATGGATTAAAGCAAGTACAAGAGCTGGCAATTGATCCCAAACTTCTTCACCCAGAAAGTAGAATGATCACTACAACTAGGGATGCACAATACATATTCTAA 744 0.3737 MTAIAECANKFKHKVFPVFYHIDPSDVRKQSGPYQKAFLLHTKKFKDDLDKVRRWRRAMIRLTALVGWHVKDMPEFEVVESVVQEVIKTLGHKLSGFDDLVGIEPRVEALKVLLKLGSKNDEFRVIGIKGMGGIGKTTLANVLYDRISCMFDACCFIENVSKTYKDGGAIAIQKQILCQAFNEINLERYSPSEVSAIIGNRLGNINVLIVLDNVDGLKQVQELAIDPKLLHPESRMITTTRDAQYIF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06571 247 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 68 IPR035897 -
Vivi2g06571 247 ProSiteProfiles TIR domain profile. 1 90 IPR000157 GO:0007165
Vivi2g06571 247 Pfam TIR domain 3 94 IPR000157 GO:0007165
Vivi2g06571 247 Gene3D - 1 93 IPR035897 -
Vivi2g06571 247 PRINTS Disease resistance protein signature 201 215 - -
Vivi2g06571 247 PRINTS Disease resistance protein signature 125 140 - -
Vivi2g06571 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 245 IPR027417 -
Vivi2g06571 247 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 244 IPR044974 GO:0006952
Vivi2g06571 247 Gene3D - 94 246 IPR027417 -
Vivi2g06571 247 Pfam NB-ARC domain 113 243 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06571 Vivi-Chr2 201851540 201852950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06571 15 242 WRKY Transcription Factor Family AT4G12020 27.074 2.97e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06571 - - vvo:131643801 306.99