Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06561 ATGAAATTTATTAAGGAAGCAAAGACTTCCTCGTATAAAACATTTCTCTTAATATTCTCATTGTTGTTTTTGTTGTCCGGTTTCGATATCTGTCATGGACAAGATGACGTTGCAGCACCGCCACCGCCCGTGGCTGAACTCGACAACTGCGACGGAATATTTCTAACGTATGCTTTAACTGGAAGGGAGAAGGAATATCCGCACGTGAAAAACGTGACGAAACAAGCGTGGGCGTTTAAAGCCGAAGTGTCGTTGATGAATGTTGGAGATGAGGAACTTAAAGATTGGAAAATGTATATTGGGTTTCAGCATAGGGAGATTCTTGTTTCCGCGGATGGAGCTGTTCCGGTTGACTCGGAGGATTTTCCGGCCGAGGTAGGGAATGGAACTACAATTGCTGGAAATCCTATGACAGATTTGAAAACTGCCATTGAAACAGCTGGTGATTATAATCAAATGGCTGTTAGGGTTAAGATGAGTGGAACTCAGTTTGGACTTGGTGCAAGTGCTACTCCTATGCCTAAAACTATTAAGCTTATGAATGATGGCTTCAAATGTCCTCAACCTGGTCGTAGAGGTTCAAGAATGTTTGTATGCTGCAAAAAGGACCCAAAAGTTAAAGCTAAACTGAATAAGAAAACAAAGTTCCTTCCCCGTCGCTATGGCGATCTAACCATATCTTACGATGTTCTTCAAGCCTTCCACACGAGCTACTACGCGCAAGTAACCATAGACAACAATCATCCATTAGGTCGTCTTGATCATTGGAACATAACATGGGAATGGCAAAAGGGAGAATTCATTAACACTCTAAAAGGTGCTTACGCTCGCATAAAAGACCCTTCGGAATGTTTATACGGTCCGGCCGGAAGATACTACGGTGACTTAGATTTCTCGACGGTTGCAAACTGTCAAAAGAAACCTATTCTCTCCGATCTTCCGACTGAAAGAGCAGAAGATGAAAAAGTTGGTAAAATACCTTGGTGTTGTAGGAATGGTACTGTTTTACCACCTATTATGGATAAGAACAAAGCAAGATCAATTTTTCAGTTGCAAGTTTTCAAAATACCACCTGATGATAACAGAACAGCACTTACACCACCAATGAAATGGCATATTGATGGAGTTATTAACCCTAAATACGCATGTGGACCCCCAATTAGGGTTGATGCACAACAATTTCCTGATCCTAGTGGACTTACAGCAATCTCAACAGCTGTTGCAAGTTGGCAGGTAGTTTGCAACATTACGAAACCGAAGCCGAAAGAAAATCGGTGTTGCGTTTCGTTCTCGGCTTTCTATAACGAATCTGCTATCCCCTGTAACACGTGTGCTTGTGGAGGTTGCGATGATACAAGGAAATGTAATCCTAACGCTTCGCCTTTACTTCTTCCACCCGACGCACTTCTCGTCCCTTTCGAGAACCGAACGGTAAAGGCACGCGCTTGGGCAAAACTCAAACACATGCGCGTTCCAAGTAAGTTACCTTGTGGAGATAATTGTCCTGTAAGTATTAACTGGCATGTAAGTTCAGATCATAAGGAGGGATGGACAGCTAGGATAACACTTTTCAATTGGGAGAATTTCGGCTTCGACGATTGGTTCGCCGCACTTAAGTTCGACAGGTCTTTCGAAGATTTTCAAGATGTTTATTCATTTAACGGGACGAGAATTCCCGGTATCAGAACCATTTTCTTTCAAGGACTGAAAGGGTTGAATTACTTAGCAGGAGAAACTAATGGAACTCGTGCGAAAGATCCAAGGGTGCCCGGGAAACAACAATCAGTGGTTTCTTTTCACAAGAAATACACTAAAGAATTCAACGTCGTGCGCGACGCTTTTCCTTCTAAGGTGTTCTTCAATGGAATGGAATGTTCACTTCCTCCGCATAGACCTGCTAAAGGTTCAGGACATAAATCTTCTATCAGCATCATCGCAGTCATTTTCACAGCATTTATGACATTCTTGCTCACAACAGATCGCTTTTTCTGA 1992 0.4252 MKFIKEAKTSSYKTFLLIFSLLFLLSGFDICHGQDDVAAPPPPVAELDNCDGIFLTYALTGREKEYPHVKNVTKQAWAFKAEVSLMNVGDEELKDWKMYIGFQHREILVSADGAVPVDSEDFPAEVGNGTTIAGNPMTDLKTAIETAGDYNQMAVRVKMSGTQFGLGASATPMPKTIKLMNDGFKCPQPGRRGSRMFVCCKKDPKVKAKLNKKTKFLPRRYGDLTISYDVLQAFHTSYYAQVTIDNNHPLGRLDHWNITWEWQKGEFINTLKGAYARIKDPSECLYGPAGRYYGDLDFSTVANCQKKPILSDLPTERAEDEKVGKIPWCCRNGTVLPPIMDKNKARSIFQLQVFKIPPDDNRTALTPPMKWHIDGVINPKYACGPPIRVDAQQFPDPSGLTAISTAVASWQVVCNITKPKPKENRCCVSFSAFYNESAIPCNTCACGGCDDTRKCNPNASPLLLPPDALLVPFENRTVKARAWAKLKHMRVPSKLPCGDNCPVSINWHVSSDHKEGWTARITLFNWENFGFDDWFAALKFDRSFEDFQDVYSFNGTRIPGIRTIFFQGLKGLNYLAGETNGTRAKDPRVPGKQQSVVSFHKKYTKEFNVVRDAFPSKVFFNGMECSLPPHRPAKGSGHKSSISIIAVIFTAFMTFLLTTDRFF 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06561 663 Pfam COBRA-like protein 238 417 IPR006918 GO:0010215|GO:0016020
Vivi2g06561 663 PANTHER COBRA-LIKE PROTEIN 7 11 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06561 Vivi-Chr2 201716629 201719119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06561 11 660 COBRA Gene Family AT3G20580 60.153 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06561 - - gmx:100789175 1055.05