Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06557 ATGGCTACCTTAATTCATGCACTGGCTATGTTTTGTTTCTTGGCTTTGATGCATAAGGGTGACTCCTATGAGTTTGTAGTTGGAGGCCAACAGGGTTGGAGTGTTCCAAGTGATCCTAATGCTAATCCTTTCAATCAATGGGCAGAAAAGAGCAGGTTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCAATCTGGCAAAGACTCGGTCACTGAAGTAAACAGCCAACAAGACTATGAGAACTGCAACACTGATGCATCTGGAAAATCCTCTGATGGCCACACGGTAATCAAACTCGACAAATCAGGTCCTCACTATTTCATAAGTGGAATCAAAGATAACTGTCTTAAGAATGAGAAACTATTGGTGATTGTTCTTGCTGACAGAACCAACAGAAACTCAAACCAAACAGCAACAACTCCTTCTCCTTCTCCTTCTGTTCCTGTTTCTCCCTCTCCTTCTCCTTTATCCTCGCACACGTCAGATGCATTGACTCCTTCCCTACCACCTTCTCAGCTAAATGGTTCGTTTCCTCCACCACCTCTTCAGCAAGTAGGGTCAGCTCCACCGCTAGGGACTGATGTGACAAATCCTGCTACTCCGACTACATCTCCGGTTTCTGAATCTCCTCCTCCTCCTCCTCCTAATGCTGCTTCTTCAATCTTGCTTAGCTTTGGTTGTTCTGTTGGAGCACTCATGGTTTCACTTCTGGTTTTTTCCAAGTGA 726 0.4477 MATLIHALAMFCFLALMHKGDSYEFVVGGQQGWSVPSDPNANPFNQWAEKSRFQVGDSLVFNYQSGKDSVTEVNSQQDYENCNTDASGKSSDGHTVIKLDKSGPHYFISGIKDNCLKNEKLLVIVLADRTNRNSNQTATTPSPSPSVPVSPSPSPLSSHTSDALTPSLPPSQLNGSFPPPPLQQVGSAPPLGTDVTNPATPTTSPVSESPPPPPPNAASSILLSFGCSVGALMVSLLVFSK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06557 241 Gene3D - 21 128 IPR008972 -
Vivi2g06557 241 MobiDBLite consensus disorder prediction 204 218 - -
Vivi2g06557 241 MobiDBLite consensus disorder prediction 172 186 - -
Vivi2g06557 241 MobiDBLite consensus disorder prediction 153 171 - -
Vivi2g06557 241 FunFam Cupredoxin superfamily protein 22 131 - -
Vivi2g06557 241 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
Vivi2g06557 241 CDD OsENODL1_like 23 126 IPR041846 -
Vivi2g06557 241 MobiDBLite consensus disorder prediction 189 203 - -
Vivi2g06557 241 Pfam Plastocyanin-like domain 33 117 IPR003245 GO:0009055
Vivi2g06557 241 PANTHER BLUE COPPER PROTEIN 24 146 IPR039391 GO:0009055
Vivi2g06557 241 SUPERFAMILY Cupredoxins 22 127 IPR008972 -
Vivi2g06557 241 MobiDBLite consensus disorder prediction 133 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06557 Vivi-Chr2 201672518 201673762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06557 4 159 Phytocyanin Superfamily AT3G20570 44.118 4.10e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06557 - - gmx:100788637 254.988