Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06552 ATGGATTCAGCAGCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGGCACTTAACTCCATACCTTCATCTCTCCAACAAACTAGCCAAAAGAGGACACAGAATCTCATTCTTCATTCCTAAAAACACACTCAACAAGTTACTTCATCTCAACCTTTATCCAAATCTTATAACATTTTTCCCTCTCAATGTTCCTCATGTTGATGGCCTTCCTCATAATGCTGAAACTACTTCTGATGTACCCTTTTCTTTATTCCCTCTTATTGCTACAGCCATGGACCGAACTGATAAACAAATTGAACTTCTTCTAGAGGAACTAAATCCACAAATTGTTTTCTTTGATTTTCAATATTGGCTACCGAATTTGACTCATAAACATGGTATCAAAAGTCTTCAATACTTGATATGGAATCCAATATCAACCGCTTACCTTGGAAATATACCGAGAAAAAGCCGAGGAAAAGAGTTAACTCAAGTTGATCTCATGAAACCACCTTCAGAGTTCCCTGATTCATATATCAAGCTTCATTCACACGAACTTCGATTCCTAGCTTCCGCAAGGAAGCTAGAATTTGGCAGCGGTGTTTTATTATACGATCGCGTTGACATAGGCACCGAATTTTCGGATGCAGTTGCATTCAAAGGTTGCAGAGAAATCGATGGTTTATATACTGATTATCTTCAAACTGTTTTTGGAAAACCTGTTCTTCTTTCAGGTCCTCTATTACCCGAGCCATCAAATACGGATTTGGAGGAAAAATGGGAATCATGGCTTAAGGGATTCAAACATGAATCTGTTATTTTCTGTGCATATGGAAGTGAAGGACCGTTAGAACTAAATCAGTTTCAAGAGCTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCGTTTCTTGCCGCACTTAAACCACCTAATGGATTTGAGTCTATTGAAGAAGCTTTACCTGAAGGGTTCAATGAAAGAGTTAAAGGAAAAGGAATTGTTTATGGAAGTTGGATTCAACAACAACTGATTTTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACCGAGGGACTTGTTAACAAGTGCCAGTTGGTTTTGTTACCACGTGCCGGCTCTGATCATATCATGAATGCAAGAGTGATGAGTAGAAAGTTGAGACTTGGTGTGGAAGTTGAGAAAGGTGACGAAGATGGATTGTTTACAAAAGAAAGTGTGTGTGAAGCTGTGAAGAATGTGATGGATGATGAGAATGAGATTGGAAGAGAAGTAAGAACAAATCATGCAAAAATAAGAAACCTCCTACTTAGCGAAAATTTAGAATCTTCATGTGTTGATAGTTTCTGTCAAAAACTGTATGATTTGCTCTAG 1377 0.3834 MDSAASLHIAMFPWFAMGHLTPYLHLSNKLAKRGHRISFFIPKNTLNKLLHLNLYPNLITFFPLNVPHVDGLPHNAETTSDVPFSLFPLIATAMDRTDKQIELLLEELNPQIVFFDFQYWLPNLTHKHGIKSLQYLIWNPISTAYLGNIPRKSRGKELTQVDLMKPPSEFPDSYIKLHSHELRFLASARKLEFGSGVLLYDRVDIGTEFSDAVAFKGCREIDGLYTDYLQTVFGKPVLLSGPLLPEPSNTDLEEKWESWLKGFKHESVIFCAYGSEGPLELNQFQELLLGLELTGFPFLAALKPPNGFESIEEALPEGFNERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNKCQLVLLPRAGSDHIMNARVMSRKLRLGVEVEKGDEDGLFTKESVCEAVKNVMDDENEIGREVRTNHAKIRNLLLSENLESSCVDSFCQKLYDLL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06552 458 Gene3D Glycogen Phosphorylase B; 2 259 - -
Vivi2g06552 458 PANTHER GLYCOSYLTRANSFERASE 7 453 - -
Vivi2g06552 458 Gene3D Glycogen Phosphorylase B; 260 438 - -
Vivi2g06552 458 FunFam Glycosyltransferase 3 255 - -
Vivi2g06552 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 332 419 IPR002213 GO:0008194
Vivi2g06552 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 439 - -
Vivi2g06552 458 CDD GT1_Gtf-like 7 434 IPR002213 GO:0008194
Vivi2g06552 458 FunFam Glycosyltransferase 256 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06552 Vivi-Chr2 201631308 201632807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06552 4 458 Glycosyltransferase AT5G54010 44.737 1.40e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06552 K22794 - gmx:100808439 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06552 2 201631308 201632807 Vivi7g01313 7 67492515 67494044 PCT