Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06545 ATGGATAATAATCACACGCAAAGCCGTAGATATAGATATGACGTGTTTATCAGTTTCAGAGGTCCTGACACGCGCAACACTTTTGTTGATCATCTTTATGCTCACCTAACAAGAAATGGTATTTTCGCTTTCATGGATGATAAAAGGCTCGAGAAAGGAGATTCCCTTTCGTCGCAACTTCTTCAAGCTATACATAATTCACGGATTTCTATTGTTGTCTTCTCTGAAACATATGCCGAGTCCAAGTGGTGTTTGGAAGAGATGGCTACTATTGCTGAATGTCATAAAGAATTCAATCAAAAAGTATTTTCTGTTTTTTATGATGTCGATCCATCTCATGTACGACATCAATCTGGGGTGTACCAAAACGCCTTTGATTTTTACCGGATGAGATTCGAAGGTGATCAGATTAAAGTTGTGAGGTGGACGAATGCTATGAAGGTTTTAGCTGACTCAGTCGGTTGGGATGTCAGGAACAAGCCAGAGTTTATAGAGATTGAAACAATTGTTCAAGCAGTAATAAAATCTTTGAATCATAAATTCTCAGGGTTAAGCAGCGATCTTGTTGGGATGCAACCTCGTGTAGAAGAATTAGAAAAGATTCTTAAATTGAACTCAAAAGATGATGATTTTCGAATTTTGGGAATTTGGGGGATGGGTGGAGTAGGAAAGACAACTCATGCCACTGTTTTGTACGACAGAATCTCTTATCGGTTTGATGCTCGTTGTTTTATTAATAACACAAGCAAACTTTATAAGGATGGTGGTATTGTTGCTGTTCAAAGACAAATTCTTCGACAAACTCTAGACGAAAGAAATCTTGACTCATACGATATTTGGGAAATTTCCAAGATTATGATAACTAGGCTTTACAGTTGCACCAATGTTCTTCTAGTTCTTGACAATGTTGATCAATTTGACCAATTGCGGGAATTACGTATAAATCCTAAATTACTTGGGAGTGGCAGTAGAATAATCATAACCACAAGGGATGAGCATATACTACGAGTATATGGAGCAGATAAAATTCACAAAGTTCCACTGTTGAATAGTAATGATGCTTCTGAACTTTTTCTTAGAAATGCCTTCAAAGGTGAAGAGCAAAGCAGCAATTGTGTTGAGTTGATTCCAGAGATACTAAAATATGCTCAAAATCTTCCATTAGCAATTAAAGTAGTTGGCTCTTTTTTGTGTACTCGAGATGCTACTCAGTGGAGAGATGCTTTGGATAGATTGAAGAACAATCCAGACAATAAAGTTATGGAAGTGCTCCAGATGAGTGTTGATGGACTACAACACGAGGAGAAGGAAATATTTCTGCACATTGCTTGTTTTTTTAAAGGGGAGAGGGAAGATTATGTAAAGAGAATTCTAGATGCATGTGGATTATACCCTCACATAGGACTTCAAAGAGTCATTGAGAAGTCACTCATTACCATTAAAAACCAAGAGATTCATATGCATGATATGTTACAAGAACTGGGAAAGAAAATTGTTCGGCACAGCTTTCTCGAAAACCCAGTGTCATGGAGTAGATTATGGCGATACAATGATTTCTCTCTTGTCTTGAAGACAAAAATGGGAACAAACAATAATGTTAAAGCTATCGTTCTGGATCAAAAGAAAAATTTCTCCAAATGCAGGGCTGAAGGATTTTCAAATATGAGCAACCTTGTACTTCTCATGTTGTATCATAACAACTTTTCAGGAAATTTGGATTTTCTTTCCAACAACTTGCGCTATCTTTTGTGGCATGGATACCCTTTTACTTCTTTGCCGTCAAATTTTGAGCCAGATTATCTTGTGGAATTGAATATGCCTGATAGTAGCATTCAACGATTGTGGGAAGGTCGCAAGGAACTACCTAATTTGAAAAGGATGGATTTGAGCAACTCCAAGTATCTTATAGAGACTCCAATGTTTTTTGGGACCCCAAAACTGGAGCGCCTAGATTTTACAGGATGCACAAACTTAATACAGGTCCATCCATCCATTGGACATCTTACAGAACTTGTTTTCTTAAGTCTGCAAAACTGCAGCAGTTTGGTCAACCTTGATTTTGGTAGTGTATCGAGATTAAGTTCTTTGAGAGTTATACGCCTTTCTGGTTGCACAAAACTTGAACAGACGCCTCATGTTTCCGGGGCATCAAATCTTGAGTACCTTGATATGGATGAATGTACAACTTTATCCAAAGTTCATGAATCCATTGGGGATTTGACAAAGCTTAAATTCTTGAGTTTGAGAAACTGCACAAATTTTGTTGGATGGCCCGATAGGATTATGAGGCTGGTATCCCTTGTAACTCTAGACTTTTGTGGTTGCTCAAGTCTTACAATTCTACCTACTGGTTATATGAAATCTTTGATTTCTCTAGATTTAAGCTTTTGCAATCTTCATGAAGTACCAGATAGTATTGGATGGTTATTCACGTTAGAAAGACTAAATCTACAAGGAAACAAATTGCGTTCACTACCTAATTGTTTCACTCTTCTTGCCAACCTAGCATATGTAAACTTATCTCATTGCCATGAGATTAGAACTATTGAACTCGGCCAACTTCCAAAAAGTGCTTCTGGAGGAAAATATTTTAACATAGCAGCGGGATCTCGTGATCATAGGTCAGGATTATATATATTTGACTGTCCTAAGTTCATGGATAAACCCAAATATCATCAATCCATAGAATATTTGTGGTTACAAAGACTGCTTCTGAATCCCCAGCATTTTCGTGGTGGCTTTGACATTGTTGTTCCTCTTGATTGGGATAAAACCGTTTCTCGATCACGTAGTTGTATTCCAAGATGGTTCAATCACCATTTTAATGGTGGTTCAATAGTAAGGATAGTAGATTTTGAAGAGTTTGACAAGAAGTTTGGCTTTGCCTTCTGTGTGGAATTTAAGGTAAAAAAAAATTGTCCTGCTAGTTCGGGTTTGCCACAGGATTCATTTTCCTCAGCACTCCCACATCCTTTATATCTTTCTTTTGAAAGTGAACACACAGAGGAACGCTTTGATATGCCGCTTAACTTGGAACTGCATAAAATTGATGGCTCCAAATATCTTTGGGTAATCTATATCTCTCAAGAGCACTGCCATTTCTTAAAAACTGGAGCGCATATCACATTTAAAGCCCGCCCAGGTTTGTCAATAAAGAAATGGGGATTGCGCTTGGTAATCAAGGATCTAAAGATATTTCATCCTCTCCCTTTGGAGTACTCATCGGACACTGATGTGCCCAAACTTGTCTTTGATTATGTACAAAAAACCAGCACGAAGTCTGGAACTAAAATCCAACTTCCTTACAATTGGTTGGTTACTGAAGAGGAAGAAGCTGAAAATTCTGGAGTCAAGTCAAAAGAATTTGATCTTTCTAATCTGGGCCTTTAG 3390 0.377 MDNNHTQSRRYRYDVFISFRGPDTRNTFVDHLYAHLTRNGIFAFMDDKRLEKGDSLSSQLLQAIHNSRISIVVFSETYAESKWCLEEMATIAECHKEFNQKVFSVFYDVDPSHVRHQSGVYQNAFDFYRMRFEGDQIKVVRWTNAMKVLADSVGWDVRNKPEFIEIETIVQAVIKSLNHKFSGLSSDLVGMQPRVEELEKILKLNSKDDDFRILGIWGMGGVGKTTHATVLYDRISYRFDARCFINNTSKLYKDGGIVAVQRQILRQTLDERNLDSYDIWEISKIMITRLYSCTNVLLVLDNVDQFDQLRELRINPKLLGSGSRIIITTRDEHILRVYGADKIHKVPLLNSNDASELFLRNAFKGEEQSSNCVELIPEILKYAQNLPLAIKVVGSFLCTRDATQWRDALDRLKNNPDNKVMEVLQMSVDGLQHEEKEIFLHIACFFKGEREDYVKRILDACGLYPHIGLQRVIEKSLITIKNQEIHMHDMLQELGKKIVRHSFLENPVSWSRLWRYNDFSLVLKTKMGTNNNVKAIVLDQKKNFSKCRAEGFSNMSNLVLLMLYHNNFSGNLDFLSNNLRYLLWHGYPFTSLPSNFEPDYLVELNMPDSSIQRLWEGRKELPNLKRMDLSNSKYLIETPMFFGTPKLERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGSVSRLSSLRVIRLSGCTKLEQTPHVSGASNLEYLDMDECTTLSKVHESIGDLTKLKFLSLRNCTNFVGWPDRIMRLVSLVTLDFCGCSSLTILPTGYMKSLISLDLSFCNLHEVPDSIGWLFTLERLNLQGNKLRSLPNCFTLLANLAYVNLSHCHEIRTIELGQLPKSASGGKYFNIAAGSRDHRSGLYIFDCPKFMDKPKYHQSIEYLWLQRLLLNPQHFRGGFDIVVPLDWDKTVSRSRSCIPRWFNHHFNGGSIVRIVDFEEFDKKFGFAFCVEFKVKKNCPASSGLPQDSFSSALPHPLYLSFESEHTEERFDMPLNLELHKIDGSKYLWVIYISQEHCHFLKTGAHITFKARPGLSIKKWGLRLVIKDLKIFHPLPLEYSSDTDVPKLVFDYVQKTSTKSGTKIQLPYNWLVTEEEEAENSGVKSKEFDLSNLGL 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06545 1129 Gene3D Ribonuclease Inhibitor 514 710 IPR032675 -
Vivi2g06545 1129 SUPERFAMILY L domain-like 548 856 - -
Vivi2g06545 1129 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Vivi2g06545 1129 Gene3D - 348 432 IPR042197 -
Vivi2g06545 1129 Pfam Leucine Rich Repeat 600 617 IPR011713 -
Vivi2g06545 1129 Gene3D Ribonuclease Inhibitor 711 860 IPR032675 -
Vivi2g06545 1129 Gene3D - 6 178 IPR035897 -
Vivi2g06545 1129 Pfam NB-ARC domain 198 428 IPR002182 GO:0043531
Vivi2g06545 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Vivi2g06545 1129 Pfam TIR domain 13 181 IPR000157 GO:0007165
Vivi2g06545 1129 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Vivi2g06545 1129 ProSiteProfiles Leucine-rich repeat profile. 811 832 IPR001611 GO:0005515
Vivi2g06545 1129 SUPERFAMILY "Winged helix" DNA-binding domain 418 523 IPR036390 -
Vivi2g06545 1129 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 711 IPR044974 GO:0006952
Vivi2g06545 1129 Gene3D - 179 342 IPR027417 -
Vivi2g06545 1129 PRINTS Disease resistance protein signature 619 635 - -
Vivi2g06545 1129 PRINTS Disease resistance protein signature 290 304 - -
Vivi2g06545 1129 PRINTS Disease resistance protein signature 213 228 - -
Vivi2g06545 1129 PRINTS Disease resistance protein signature 383 397 - -
Vivi2g06545 1129 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Vivi2g06545 1129 SMART till_3 12 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06545 Vivi-Chr2 201543188 201549730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06545 691 858 WRKY Transcription Factor Family AT4G12020 34.320 8.60e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06545 - - var:108332841 1301.19