Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06524 ATGCAAGGAGCTGAAGCTTCCAATTCTTCCATGGATTATAGTAACAATCAAACCTGTAGATATGATGTGTTTATCAGTTTCAGAGGTCCCGACACACGCAACAATTTTGTCGACCATCTTTATGATCATCTAACTAGAAAGGGTATTTTTGCCTTCAAGGATGATAGGAGGCTTGAGAAAGGAGATTCCCTTTCCCCACAACTTCTACAAGCAATTCAAAATTCACGGATTTCTATTGTTGTCTTCTCTAAAACATATGCCGACTCTACATGGTGTTTAGAAGAGATGGCTACTATAGCTGAATGCCGTAAAGAATTCAATCAAAAAGTATTTCCTATTTTTTATGATGTCGATCCATCTCATGTACGACATCGGAGAGGGCTGTACCAAAACGCCTTTGATTTATACCGGATGAGATTCAAACATGATCAGAGAAAGGTTGGGAGGTGGAAGAAAGCTATGGACGTTTTAGCTAACTTAGTCGGTTGGGATATCAGGAACAAGCCAGAATCTATAGAGATCAAAAAAATTGTTCAAGCAATAATAAAAACTTTGAATCATAAATTCTCAGGGTTTACCAACGATCTTGTTGGGATGCAACCTCGCATAGAAGAATTAGAAAAGCTTCTAAGATTGAGCTCAATGGATGATGACTTTCGAGTATTGGGAATTTGGGGGATGGGTGGAGTAGGGAAGACAACTCATGCTGCTGCTTTGTACGATAGAATCTCTTATCAGTTTGATGCTTGTTGTTTTATTAATAACACTAGCAAACTTTATATGGATGGTGGCGTGGTTGCTGTACAAAAACAGATTCTTCGTCAAGCTCTAGATGAAAGAAATCTAGACGCATACGATACTTGTGAGATAACTGGGATTATGATAAATAGACTTCAGAGTGGCATTAAGGTCCTTCTAGTTCTTGACAATGTTGATCAATATGAACAATTGGAGGAATTGGCTATAGATCCTAAATTGCTTTACAAAGAAAGTAGAATAATCATAACTACAAGGGACGAGCATATTCTAAGAGTGTATGGGGTGGATAAAATTCATGAAGTTCCCCTGTTGAATAGTAATGATGCTTCTGAACTTTTTCGCAGAAGAGCTTTCAAAGGTGAAGACCAAAGCAGCAATTGTGTTGAGTTGATTCCAGAGATACTAAAATATGTTCAAAATCTTCCTTTAGCAATTAAAGTAGTGGGCTCTTTCTTGTGTAATCGAGATGCTACTCAGTGGAGAGATGCTTTGGATAGATTGAAGAACAATCCAGACAATAAAATTATGGATGTGCTTCAGATGAGTGTTGATGGACTAGAACATGAGGAGAAGGAAATATTTCTGCACATTGCTTGTTTTTTTAAAGGGGAGAGGGAAGATTATGTAAAGAGAATTCTAGATGCATGTGGATTATACCCTCACATAGGAATTCAAAGAGTCATTGAGAAGTCACTCATTACCATTAAAAACCAAGAGATTCATATGCATGATATGTTACAAGAACTTGGGAAGAAAATAGTTCGGCACAGCTTTCTCGAAGACCCAATATTGTGGAGTAGAATATGGCAATACCATGATTTCTATCAAGTCTTGACATCAGAAACGGGAACAAATAATGTTAAAGCTATAGTTCTGGATCAAAAGGAAAGTTTCTCCAAATGCAGGGCTGAAGGATTTTCAAATATGAGCAACCTTGCACTTCTCATATTGTATCATAATAATTTTTCAGGAAATTTGGATTTTCTTTCCAACAACTTGCGGTATCTTTTGTGGAACGGATGTCCTTTTACTTCTTTGCCGTCAAACTTTGAACCACATTATCTTGTGGAATTGAATATTCCTGATAGTAGCATTCAACGACTGTGGGAAGGTCGCAAGGAACTACCTAATTTGAAAAGGATGGATTTGAGCAACTCCAAGTATCTTATAGAGACTCCAAAGTTTTTTTGGACCCCAAAACTGGAGCGGCTAGATTTTACCGGATGCACAAACTTAATACAGGTCCATCCGTCAATTGGACATCTTACAGAACTTGTTTTCTTATGTTTGCAAAACTGCAGCAGTTTGGTTGACCTTGATTTTGGCAGTGTATCAAGATTAAATTCTCTGAGAGTTCTACGCCTTTCCGGTTGTACAAAACTTGAAAAGACGCCTGATTTTACCGGGGCATCAAATCTTGAATACCTTGATATGGATGAATGTACAACTTTATCCAAAGTTCATGAATCCATTGGGGCTTTGACAAAGCTTAAATTCTTGAGTTTGAGAAACTGCACAAATCTGGTTGAAATGCCTGATAGGATTAAGAGGATGGCGTCCCTTGTAACTCTAGATTTTTGCGGTTGCTCGAGTCTTACAATTCTACCCTTGAAACGGACTCGTACTGATCATATGAGATCTTTGATTTTTCTAGATTTAAGCTTTTGCAATCTTCATGAAGTACCAAATACTATTGGAACGTTACGTACGTTAGAAAGGCTAAATCTACAAGGAAACAAATTCCGTTCACTACCTGATGATTTCTTTGATCTTGACAACCTAGCATATGTAAATTTATCTCATTGCCATGAGCTTGAAAGTATTGAACTCCAATTTTCACAAAGTACTTCACAAAGTGCTTCAAAAAGTGCTTCTTCAGGAGGAAGATATTTTAACATGGTAGCGGGATCTCGTGATCATAGGTCAGGATTTTATATATTTGACTGCCCTAATTTCATTGTTAAATCCAAAGACAAATCCATAGAATGTTCATGGTTACAAAGACTACTTCAGAGTCCCCATCACTTTCGGGGTGGCTTTGACATTGTTGTTCCTTGGAATAGGGAAAACATTGATTCTCCGTCAAGTTGTTGTATTCCAAAATGGTTCAATTACCAATTTGATAGTGATTCAATAGTAAGGATAGTGGACTTTGACGAGTTTGACATGAAGTTTGGCTTTGCCTTCTGTGTGGAATTTGAGGTAAACAATAGTCCTGCGAGTTCGGGTTTGCCACAAGATTCATTTTCCTCAGCACTCCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAGGAACGCTTCGACATGCCACTTAGTTTGGAACTGCACAAAGTTGATGGCTCCAAACATCTTTGGCTAATCTATATCTCTCAAGAGCACTGCCATTTTTTAAAAACTGGAGCACATATCACATTTAAAGCCGGCCCAGGGTTGTCGATAAAGAAATGGGGATTACGCTTGGCAATCAAGGATCTAAGGAAATCATATCGTGTGCCAAGCGACTGGGAACACTCATCGGACTCTTATGCGCCCCAACTTTTCTTAGATTATGTACAAAAAACCAGCATGAAGTCTGGAACTAAAATCCAACTTCCGTACAATTGGTTTGTTACTGAAGAGGAAGAAGTTGAGAATTCAGGAGCAAAGTCAAAAGAAACTGCTCTTTCTAATCTGGGCCTTTAG 3450 0.3809 MQGAEASNSSMDYSNNQTCRYDVFISFRGPDTRNNFVDHLYDHLTRKGIFAFKDDRRLEKGDSLSPQLLQAIQNSRISIVVFSKTYADSTWCLEEMATIAECRKEFNQKVFPIFYDVDPSHVRHRRGLYQNAFDLYRMRFKHDQRKVGRWKKAMDVLANLVGWDIRNKPESIEIKKIVQAIIKTLNHKFSGFTNDLVGMQPRIEELEKLLRLSSMDDDFRVLGIWGMGGVGKTTHAAALYDRISYQFDACCFINNTSKLYMDGGVVAVQKQILRQALDERNLDAYDTCEITGIMINRLQSGIKVLLVLDNVDQYEQLEELAIDPKLLYKESRIIITTRDEHILRVYGVDKIHEVPLLNSNDASELFRRRAFKGEDQSSNCVELIPEILKYVQNLPLAIKVVGSFLCNRDATQWRDALDRLKNNPDNKIMDVLQMSVDGLEHEEKEIFLHIACFFKGEREDYVKRILDACGLYPHIGIQRVIEKSLITIKNQEIHMHDMLQELGKKIVRHSFLEDPILWSRIWQYHDFYQVLTSETGTNNVKAIVLDQKESFSKCRAEGFSNMSNLALLILYHNNFSGNLDFLSNNLRYLLWNGCPFTSLPSNFEPHYLVELNIPDSSIQRLWEGRKELPNLKRMDLSNSKYLIETPKFFWTPKLERLDFTGCTNLIQVHPSIGHLTELVFLCLQNCSSLVDLDFGSVSRLNSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDECTTLSKVHESIGALTKLKFLSLRNCTNLVEMPDRIKRMASLVTLDFCGCSSLTILPLKRTRTDHMRSLIFLDLSFCNLHEVPNTIGTLRTLERLNLQGNKFRSLPDDFFDLDNLAYVNLSHCHELESIELQFSQSTSQSASKSASSGGRYFNMVAGSRDHRSGFYIFDCPNFIVKSKDKSIECSWLQRLLQSPHHFRGGFDIVVPWNRENIDSPSSCCIPKWFNYQFDSDSIVRIVDFDEFDMKFGFAFCVEFEVNNSPASSGLPQDSFSSALPHPFYLSFESEHTEERFDMPLSLELHKVDGSKHLWLIYISQEHCHFLKTGAHITFKAGPGLSIKKWGLRLAIKDLRKSYRVPSDWEHSSDSYAPQLFLDYVQKTSMKSGTKIQLPYNWFVTEEEEVENSGAKSKETALSNLGL 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06524 1149 Gene3D - 187 351 IPR027417 -
Vivi2g06524 1149 SMART LRR_typ_2 821 844 IPR003591 -
Vivi2g06524 1149 SMART LRR_typ_2 798 819 IPR003591 -
Vivi2g06524 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 450 IPR027417 -
Vivi2g06524 1149 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Vivi2g06524 1149 Pfam Leucine rich repeat 804 856 IPR001611 GO:0005515
Vivi2g06524 1149 SUPERFAMILY L domain-like 495 868 - -
Vivi2g06524 1149 Gene3D - 356 440 IPR042197 -
Vivi2g06524 1149 PRINTS Disease resistance protein signature 298 312 - -
Vivi2g06524 1149 PRINTS Disease resistance protein signature 391 405 - -
Vivi2g06524 1149 PRINTS Disease resistance protein signature 626 642 - -
Vivi2g06524 1149 PRINTS Disease resistance protein signature 221 236 - -
Vivi2g06524 1149 Gene3D Ribonuclease Inhibitor 538 720 IPR032675 -
Vivi2g06524 1149 Gene3D Ribonuclease Inhibitor 795 880 IPR032675 -
Vivi2g06524 1149 Gene3D Ribonuclease Inhibitor 721 794 IPR032675 -
Vivi2g06524 1149 SMART till_3 20 160 IPR000157 GO:0007165
Vivi2g06524 1149 Pfam TIR domain 21 189 IPR000157 GO:0007165
Vivi2g06524 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 715 IPR044974 GO:0006952
Vivi2g06524 1149 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Vivi2g06524 1149 Pfam NB-ARC domain 211 426 IPR002182 GO:0043531
Vivi2g06524 1149 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Vivi2g06524 1149 Gene3D - 14 186 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06524 Vivi-Chr2 201336465 201343791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06524 21 827 WRKY Transcription Factor Family AT4G12020 30.492 5.05e-91 320