Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi2g06523 | ATGCAAGGAGCTGAAGCTTCCAATTCTTCCATGGATTATAGTAACAATCAAACCTGTAGATATGATGTGTTTATCAGTTTCAGAGGTCCCGACACACGCAACAATTTTGTCGACCATCTTTATGATCATCTAACTAGAAAGGGTATTTTTGCCTTCAAGGATGATAGGAGGCTTGAGAAAGGAGATTCCCTTTCCCCACAACTTCTACAAGCAATTCAAAATTCACGGATTTCTATTGTTGTCTTCTCTAAAACATATGCCGACTCTACATGGTGTTTAGAAGAGATGGCTACTATAGCTGAATGCCGTAAAGAATTCAATCAAAAAGTATTTCCTATTTTTTATGATGTCGATCCATCTCATGTACGACATCGGAGAGGGCTGTACCAAAACGCCTTTGATTTATACCGGATGAGATTCAAACATGATCAGAGAAAGGTTGGGAGGTGGAAGAAAGCTATGGACGTTTTAGCTAACTTAGTCGGTTGGGATATCAGGAACAAGCCAGAATCTATAGAGATCAAAAAAATTGTTCAAGCAATAATAAAAACTTTGAATCATAAATTCTCAGGGTTTACCAACGATCTTGTTGGGATGCAACCTCGCATAGAAGAATTAGAAAAGCTTCTAAGATTGAGCTCAATGGATGATGACTTTCGAGTATTGGGAATTTGGGGGATGGGTGGAGTAGGGAAGACAACTCATGCTGCTGCTTTGTACGATAGAATCTCTTATCAGTTTGATGCTTGTTGTTTTATTAATAACACTAGCAAACTTTATATGGATGGTGGCGTGGTTGCTGTACAAAAACAGATTCTTCGTCAAGCTCTAGATGAAAGAAATCTAGACGCATACGATACTTGTGAGATAACTGGGATTATGATAAATAGACTTCAGAGTGGCATTAAGGTCCTTCTAGTTCTTGACAATGTTGATCAATATGAACAATTGGAGGAATTGGCTATAGATCCTAAATTGCTTTACAAAGAAAGTAGAATAATCATAACTACAAGGGACGAGCATATTCTAAGAGTGTATGGGGTGGATAAAATTCATGAAGTTCCCCTGTTGAATAGTAATGATGCTTCTGAACTTTTTCGCAGAAGAGCTTTCAAAGGTGAAGACCAAAGCAGCAATTGTGTTGAGTTGATTCCAGAGATACTAAAATATGTTCAAAATCTTCCTTTAGCAATTAAAGTAGTGGGCTCTTTCTTGTGTAATCGAGATGCTACTCAGTGGAGAGATGCTTTGGATAGATTGAAGAACAATCCAGACAATAAAATTATGGATGTGCTTCAGATGAGTGTTGATGGACTAGAACATGAGGAGAAGGAAATATTTCTGCACATTGCTTGTTTTTTTAAAGGGGAGAGGGAAGATTATGTAAAGAGAATTCTAGATGCATGTGGATTATACCCTCACATAGGAATTCAAAGAGTCATTGAGAAGTCACTCATTACCATTAAAAACCAAGAGATTCATATGCATGATATGTTACAAGAACTTGGGAAGAAAATAGTTCGGCACAGCTTTCTCGAAGACCCAATATTGTGGAGTAGAATATGGCAATACCATGATTTCTATCAAGTCTTGACATCAGAAACGGGAACAAATAATGTTAAAGCTATAGTTCTGGATCAAAAGGAAAGTTTCTCCAAATGCAGGGCTGAAGGATTTTCAAATATGAGCAACCTTGCACTTCTCATATTGTATCATAATAATTTTTCAGGAAATTTGGATTTTCTTTCCAACAACTTGCGGTATCTTTTGTGGAACGGATGTCCTTTTACTTCTTTGCCGTCAAACTTTGAACCACATTATCTTGTGGAATTGAATATTCCTGATAGTAGCATTCAACGACTGTGGGAAGGTCGCAAGGAACTACCTAATTTGAAAAGGATGGATTTGAGCAACTCCAAGTATCTTATAGAGACTCCAAAGTTTTTTTGGACCCCAAAACTGGAGCGGCTAGATTTTACCGGATGCACAAACTTAATACAGGTCCATCCGTCAATTGGACATCTTACAGAACTTGTTTTCTTATGTTTGCAAAACTGCAGCAGTTTGGTTGACCTTGATTTTGGCAGTGTATCAAGATTAAATTCTCTGAGAGTTCTACGCCTTTCCGGTTGTACAAAACTTGAAAAGACGCCTGATTTTACCGGGGCATCAAATCTTGAATACCTTGATATGGATGAATGTACAACTTTATCCAAAGTTCATGAATCCATTGGGGCTTTGACAAAGCTTAAATTCTTGAGTTTGAGAAACTGCACAAATCTGGTTGAAATGCCTGATAGGATTAAGAGGATGGCGTCCCTTGTAACTCTAGATTTTTGCGGTTGCTCGAGTCTTACAATTCTACCCTTGAAACGGACTCGTACTGATCATATGAGATCTTTGATTTTTCTAGATTTAAGCTTTTGCAATCTTCATGAAGTACCAAATACTATTGGAACGTTACGTACGTTAGAAAGGCTAAATCTACAAGGAAACAAATTCCGTTCACTACCTGATGATTTCTTTGATCTTGACAACCTAGCATATGTAAATTTATCTCATTGCCATGAGCTTGAAAGTATTGAACTCCAATTTTCACAAAGTACTTCACAAAGTGCTTCAAAAAGTGCTTCTTCAGGAGGAAGATATTTTAACATGGTAGCGGGATCTCGTGATCATAGGTCAGGATTTTATATATTTGACTGCCCTAATTTCATTGTTAAATCCAAAGACAAATCCATAGAATGTTCATGGTTACAAAGACTACTTCAGAGTCCCCATCACTTTCGGGGTGGCTTTGACATTGTTGTTCCTTGGAATAGGGAAAACATTGATTCTCCGTCAAGTTGTTGTATTCCAAAATGGTTCAATTACCAATTTGATAGTGATTCAATAGTAAGGATAGTGGACTTTGACGAGTTTGACATGAAGTTTGGCTTTGCCTTCTGTGTGGAATTTGAGGTAAACAATAGTCCTGCGAGTTCGGGTTTGCCACAAGATTCATTTTCCTCAGCACTCCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAGGAACGCTTCGACATGCCACTTAGTTTGGAACTGCACAAAGTTGATGGCTCCAAACATCTTTGGCTAATCTATATCTCTCAAGAGCACTGCCATTTTTTAAAAACTGGAGCACATATCACATTTAAAGCCGGCCCAGGGTTGTCGATAAAGAAATGGGGATTACGCTTGGCAATCAAGGATCTAAGGAAATCATATCGTGTGCCAAGCGACTGGGAACACTCATCGGACTCTTATGCGCCCCAACTTTTCTTAGATTATGTACAAAAAACCAGCATGAAGTCTGGAACTAAAATCCAACTTCCGTACAATTGGTTTGTTACTGAAGAGGAAGAAGTTGAGAATTCAGGAGCAAAGTCAAAAGAAACTGCTCTTTCTAATCTGGGCCTTTAG | 3450 | 0.3809 | MQGAEASNSSMDYSNNQTCRYDVFISFRGPDTRNNFVDHLYDHLTRKGIFAFKDDRRLEKGDSLSPQLLQAIQNSRISIVVFSKTYADSTWCLEEMATIAECRKEFNQKVFPIFYDVDPSHVRHRRGLYQNAFDLYRMRFKHDQRKVGRWKKAMDVLANLVGWDIRNKPESIEIKKIVQAIIKTLNHKFSGFTNDLVGMQPRIEELEKLLRLSSMDDDFRVLGIWGMGGVGKTTHAAALYDRISYQFDACCFINNTSKLYMDGGVVAVQKQILRQALDERNLDAYDTCEITGIMINRLQSGIKVLLVLDNVDQYEQLEELAIDPKLLYKESRIIITTRDEHILRVYGVDKIHEVPLLNSNDASELFRRRAFKGEDQSSNCVELIPEILKYVQNLPLAIKVVGSFLCNRDATQWRDALDRLKNNPDNKIMDVLQMSVDGLEHEEKEIFLHIACFFKGEREDYVKRILDACGLYPHIGIQRVIEKSLITIKNQEIHMHDMLQELGKKIVRHSFLEDPILWSRIWQYHDFYQVLTSETGTNNVKAIVLDQKESFSKCRAEGFSNMSNLALLILYHNNFSGNLDFLSNNLRYLLWNGCPFTSLPSNFEPHYLVELNIPDSSIQRLWEGRKELPNLKRMDLSNSKYLIETPKFFWTPKLERLDFTGCTNLIQVHPSIGHLTELVFLCLQNCSSLVDLDFGSVSRLNSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDECTTLSKVHESIGALTKLKFLSLRNCTNLVEMPDRIKRMASLVTLDFCGCSSLTILPLKRTRTDHMRSLIFLDLSFCNLHEVPNTIGTLRTLERLNLQGNKFRSLPDDFFDLDNLAYVNLSHCHELESIELQFSQSTSQSASKSASSGGRYFNMVAGSRDHRSGFYIFDCPNFIVKSKDKSIECSWLQRLLQSPHHFRGGFDIVVPWNRENIDSPSSCCIPKWFNYQFDSDSIVRIVDFDEFDMKFGFAFCVEFEVNNSPASSGLPQDSFSSALPHPFYLSFESEHTEERFDMPLSLELHKVDGSKHLWLIYISQEHCHFLKTGAHITFKAGPGLSIKKWGLRLAIKDLRKSYRVPSDWEHSSDSYAPQLFLDYVQKTSMKSGTKIQLPYNWFVTEEEEVENSGAKSKETALSNLGL | 1149 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi2g06523 | 1149 | Gene3D | - | 187 | 351 | IPR027417 | - | |
| Vivi2g06523 | 1149 | SMART | LRR_typ_2 | 821 | 844 | IPR003591 | - | |
| Vivi2g06523 | 1149 | SMART | LRR_typ_2 | 798 | 819 | IPR003591 | - | |
| Vivi2g06523 | 1149 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 191 | 450 | IPR027417 | - | |
| Vivi2g06523 | 1149 | ProSiteProfiles | TIR domain profile. | 19 | 185 | IPR000157 | GO:0007165 | |
| Vivi2g06523 | 1149 | Pfam | Leucine rich repeat | 804 | 856 | IPR001611 | GO:0005515 | |
| Vivi2g06523 | 1149 | SUPERFAMILY | L domain-like | 495 | 868 | - | - | |
| Vivi2g06523 | 1149 | Gene3D | - | 356 | 440 | IPR042197 | - | |
| Vivi2g06523 | 1149 | PRINTS | Disease resistance protein signature | 298 | 312 | - | - | |
| Vivi2g06523 | 1149 | PRINTS | Disease resistance protein signature | 391 | 405 | - | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi2g06523 | - | - | var:108332841 | 1340.1 |
Showing 1 to 1 of 1 entries