Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06522 ATGTACAAACGTAGATTCAACACTAAGCCAGTGTATGTTACTGACCATGATGAGCCCGAGCCCGAGCCTGAACCCGAGCCCATATCGGAAGATGGTCCTGCTTCTCCTTCTTGTGAAGACGTAAAAATTGAAGAACCGTCGCCTAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCGATTGCTGACGTGGAAGGATCTAAGAACAAAGGAGAGACGTATCCACCGTCGGATTCATGGGCTTGGAGAAAGTATGGTCAAAAGCCTATCAAAGGCTCCCCTTATCCCAGGGGTTATTACCGATGTAGCAGTTCAAAAGGGTGTCCCGCTAGGAAACAAGTTGAGCGAAGCCGCGTGGACCCCACAAAGCTTCTCGTAACCTACGCTCACGACCACAACCACTCCCTCCCTCTTCCCAAATCTCATTCATCTTCTTCCACCACCGTAACCGTCACCGTCGAATCTCCATCTCCATCTCCCGGCGACTCTTCCGGCGAATGTAACACTAATACTATTTCTCCCGCCGCTACTCCACAGCCGGAGAATCTAACCGTTTTCGCCACTGACTTCGACCTCTCCGGTGATTCAACGGTTCTGCACAGCCAACACCACCACCACGCCGTGTTTGGCTGGTTCGATGACGTTGCATCTACAGGTGTTTTTGTGAGTCCGATCTGCGGAGGAGTGGAGGATATAACGCTGACGATGAGGGAGGAGGATGAATCGTTGTTTGCAGATCTTGGAGAGTTGCCGGAATGTTCAACGGTTTTCCGGAAGAGGAATATTCCGAGCGCGATTCAGTGTAGTGGCATCACAGGATAA 828 0.5085 MYKRRFNTKPVYVTDHDEPEPEPEPEPISEDGPASPSCEDVKIEEPSPKKRREMKKRVVTIPIADVEGSKNKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLLVTYAHDHNHSLPLPKSHSSSSTTVTVTVESPSPSPGDSSGECNTNTISPAATPQPENLTVFATDFDLSGDSTVLHSQHHHHAVFGWFDDVASTGVFVSPICGGVEDITLTMREEDESLFADLGELPECSTVFRKRNIPSAIQCSGITG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06522 275 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06522 275 MobiDBLite consensus disorder prediction 140 182 - -
Vivi2g06522 275 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06522 275 Gene3D WRKY domain 65 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g06522 275 MobiDBLite consensus disorder prediction 134 182 - -
Vivi2g06522 275 Pfam WRKY DNA -binding domain 80 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06522 275 MobiDBLite consensus disorder prediction 66 85 - -
Vivi2g06522 275 MobiDBLite consensus disorder prediction 42 56 - -
Vivi2g06522 275 SUPERFAMILY WRKY DNA-binding domain 74 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g06522 275 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 257 IPR044810 GO:0003700
Vivi2g06522 275 FunFam WRKY transcription factor 65 64 139 - -
Vivi2g06522 275 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06522 Vivi-Chr2 201331839 201335060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06522 24 269 WRKY Transcription Factor Family AT3G58710 50.397 8.24e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g06522 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06522 - - cam:101504205 402.905