Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06471 ATGGTGGAAGATGAAGATTACAGAAGGAAAGCCAAGATTGCACTTGTAGCTATTGTGCTACTTGCTTCCTTAGCTGTTTTCGCTTCTTTTGTTGCTCTTGCTTACTATTGTTACATCCGTAACGAGGTTTCCAAGCGCCGACGTAACAGTCATAAAGTTGAAGATGCTAACGTTAATGAGAAAAGTGATTTTTCAAATCTGCAAGTTGTTGCTGAGGAAGGACTTAAGGTGTTCACTTTTAAGCAGCTGCATTCTGCTACTGGGGGATTCAGCAAGTCGAATGTGGTGGGTCATGGTGGATTTGGACTAGTTTACCGTGGAGTGCTCAATGATGGAAGGAAGGTTGGGATTAAGTTTATGGATCAAGCCGGAAAGCAAGGAGAAGAAGAGTTTAAAGTCGAGGTGGAATTGCTAAGTCGGTTGCATTCACCATATTTGCTTGCATTGCTTGGATACTGCTCTGATCATAATCATAAGCTGTTGGTGTATGAATTTATGGCGAATGGTGGCTTACAAGAACATCTTTATCCCGTCAGCAATAACAATTCTAGTGTCACATCTGTTAATTTGGATTGGGAAACTCGATTAAGAATCGCACTTGAAGCTGCCAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCTCCGGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGACAAAAAATTTCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGTCGGTGGACATGTTTCAACTCGCGTTCTAGGCACCCAAGGATACGTTGCCCCCGAATATGCACTAACAGGACATTTAACAACAAAATCAGATGTGTATAGTTACGGTGTCGTACTTTTGGAGCTTCTTACCGGCCGAGTGCCTGTTGATATGAAGAGACCTCCTGGAGAAGGCGTACTCGTTACTTGGGCTTTGCCCCTTTTGACTGATAGAGAAAAAGTTGTAAAGATTATGGATCCAGCATTGGAGGGACAATATTCAATGAAAGATGTCATTCAAGTAGCAGCGATTGCGACAATGTGTGTGCAACCAGAAGCAGATTACAGACCTCTCATGGCAGATGTAGTGCAGTCTTTGGTTCCATTGGTGAAGACTCACCGATCCAACTCAAAAGTAGGCAGCTGCTCTAGTTTCAATTCACCCAAGTTGTCACCTGGCCCTGCCCAACAACCAGATAATGCAAATATGTAA 1218 0.4286 MVEDEDYRRKAKIALVAIVLLASLAVFASFVALAYYCYIRNEVSKRRRNSHKVEDANVNEKSDFSNLQVVAEEGLKVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLNDGRKVGIKFMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDHNHKLLVYEFMANGGLQEHLYPVSNNNSSVTSVNLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVTWALPLLTDREKVVKIMDPALEGQYSMKDVIQVAAIATMCVQPEADYRPLMADVVQSLVPLVKTHRSNSKVGSCSSFNSPKLSPGPAQQPDNANM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06471 405 CDD STKc_IRAK 96 371 - -
Vivi2g06471 405 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Vivi2g06471 405 MobiDBLite consensus disorder prediction 378 405 - -
Vivi2g06471 405 SUPERFAMILY Protein kinase-like (PK-like) 73 368 IPR011009 -
Vivi2g06471 405 Pfam Protein kinase domain 91 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06471 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Vivi2g06471 405 Gene3D Transferase(Phosphotransferase) domain 1 166 387 - -
Vivi2g06471 405 FunFam Serine/threonine-protein kinase PBS1 56 165 - -
Vivi2g06471 405 PANTHER OS07G0668900 PROTEIN 54 378 - -
Vivi2g06471 405 FunFam Receptor-like serine/threonine-protein kinase ALE2 166 385 - -
Vivi2g06471 405 ProSiteProfiles Protein kinase domain profile. 90 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06471 Vivi-Chr2 201072286 201074687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06471 1 394 Receptor kinase-like Gene Family AT3G58690 76.904 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi2g06471 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06471 - - psat:127086543 751.895