Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06467 ATGGAAGAGATAATTCACATATCTAATGAAGACATCAAGAATGAAGGTAACAACGAAATCGGAGCGAAACCCTCTTCACCAAGTCGAAGAAAACGTTCGTTCTTCGACTTAAACGAAGAAGCGGTGAATGATGGAGATGATGATCATGTGATACTACTTGTAAGTGATGAAGGCCCTAATAGTGGTGAGATAAGCAACAACAAAGAGATATCATCACAAGAAGGTACTTTAAGTAGCAATGATCATAATTCAAGTGATCAAGAAAGGAAAGGGCGTGGAAGTACGGTTAGACAATATGTTAGGTCGAAAATGCCTAGGCTTCGTTGGACTCCTGATCTTCATTTATCTTTTGTGCATGCTGTTGAGAGGCTTGGAGGGCAAGAAAGAGCAACACCCAAGTTGGTTCTCCAATTGATGAATGTGAGAGGACTTAGCATTGCACACGTGAAGAGTCATTTGCAGATGTATAGGAGTAAAAAACTTGATGAGTCTGGCCAAGTTTTATCCCAGAAAAATAGGGAGATGCAAGGAAAGCATCATCACATTTTGGATATGTATGGAAGATTTAATGTTCAAGGACACTTTGGTGTTAATAATAACAACTATTATCACCCATATAATGAAATCAAAGCTCATAGCACTTCAAGGTTTCATCAGAATGGGCTTTTCAATAATCATGTGATCTTAAGATCAAGTTCAATGTGGGACAAAGATTTATATAAGACAAGTTCACATATATTTGATGTTAAAGATGCAATAACAAGAAATAGTAATGGAGCTATAAATTCTACTCAAATAAATCAAATACTACCTGAAGAAAAGAAATGGCCTCCTCGATTACAAGGAAGTGAAAATCATGAAATTAAAAGCTTGTTTCGAGATGATCATAGTGCACAGCAATTTTCATGGAATCCTGTCTTCACTAAGGTACATGATAAAAAGGATCAAATGCAAGAATTCAAACACCAAACTCAAGTATCAAAGAAAGAGTATACACCAAGTTTCTTAGAACTAAAGTTAAGTCGAGACTCAGATATTAGCGTTAAGAATCAGATAAATATGAAACCAGCGGACAAAGAAGAAATACCCACCTTTCTCTCTCTTTAG 1107 0.3622 MEEIIHISNEDIKNEGNNEIGAKPSSPSRRKRSFFDLNEEAVNDGDDDHVILLVSDEGPNSGEISNNKEISSQEGTLSSNDHNSSDQERKGRGSTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQKNREMQGKHHHILDMYGRFNVQGHFGVNNNNYYHPYNEIKAHSTSRFHQNGLFNNHVILRSSSMWDKDLYKTSSHIFDVKDAITRNSNGAINSTQINQILPEEKKWPPRLQGSENHEIKSLFRDDHSAQQFSWNPVFTKVHDKKDQMQEFKHQTQVSKKEYTPSFLELKLSRDSDISVKNQINMKPADKEEIPTFLSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06467 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 84 240 IPR046955 GO:0003700
Vivi2g06467 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 161 IPR017930 -
Vivi2g06467 368 MobiDBLite consensus disorder prediction 1 17 - -
Vivi2g06467 368 MobiDBLite consensus disorder prediction 1 32 - -
Vivi2g06467 368 FunFam Myb family transcription factor 103 161 - -
Vivi2g06467 368 MobiDBLite consensus disorder prediction 59 82 - -
Vivi2g06467 368 SUPERFAMILY Homeodomain-like 103 159 IPR009057 -
Vivi2g06467 368 Pfam Myb-like DNA-binding domain 107 157 IPR001005 -
Vivi2g06467 368 Gene3D - 104 161 - -
Vivi2g06467 368 MobiDBLite consensus disorder prediction 46 99 - -
Vivi2g06467 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 105 160 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06467 Vivi-Chr2 200988285 200992304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06467 96 185 G2-like Transcription Factor Family AT2G42660 67.778 4.63e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi2g06467 Myb_DNA-binding 9.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06467 - - mtr:25487436 410.994