Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06431 ATGGAAGGGGATGATAAGAAGGCAGAGGCAAAGATGGTCGGTACTTCCGCTACCGGATATATTGATGAGAGTATATTTCCGCCATCACCATTCGAGTCTTCATTCTTCAATGAGCTTCACATCAATGAAGAACCTTCTCAAACTGAAACTGCTGCTACTTCTTCTCCCAACCTAACAATAAGGAAGATAAAAGAGGAGGAACCTTCTTCAGGAACTCCAACCAAGAGGAAAAGAGGACGCCCTCTTGGTCCCGGTTCCGGATCAAAGAAAGAAGGACTTTCTCCAACAATTTCTGCAGAATCTCCAACCAAGAGAACCCCCGACAGCCCTTCTGCTACTGGTGGTGCTAAATTCACCCCTCATGTGATTCACTTTAATGCTGGCGAGGATGTGGTAGAGGTTCTGTACAAAATATCCGTGGCAAATCGTGGTAAAACTGTTACCGTACTTTCTGCAAATGGTTCTATATCAGAAATTGTCTATCTTACTCCAAATGGTCTCTGGCAGAGCAAGGGAGAATTTCACCTATTGTCTTTAAAATGGCCCGATGATGATAATGGTCGTCGCAGTCGTGAAAAGACAGTGTGCACAATTACAGGCACAAGTGCTGAGGGAAATCTGTTTGCAAATACTTCTGTCAATTCCCTCATTGCGGCCGGCCATGTTAAAATTACGGCAGGCTTATTCAACACAGACACCGCTGAGAAAACAGGTGCAAGAATTTCGGCTGCTGCTCTTCAAATGTTTGAGGCCAATATGGATCCAGCTAAAGAAGGTTCTACATCTGGATATTTGCCAACAACTCCAATAGTGGGAGATGGAAGCATAATAAGTCCCACATCAGCAACAACTAGTGCTTCAAATGATCAGGACATGAAGTCTCCATCTGTTGGGAACACTTGA 903 0.443 MEGDDKKAEAKMVGTSATGYIDESIFPPSPFESSFFNELHINEEPSQTETAATSSPNLTIRKIKEEEPSSGTPTKRKRGRPLGPGSGSKKEGLSPTISAESPTKRTPDSPSATGGAKFTPHVIHFNAGEDVVEVLYKISVANRGKTVTVLSANGSISEIVYLTPNGLWQSKGEFHLLSLKWPDDDNGRRSREKTVCTITGTSAEGNLFANTSVNSLIAAGHVKITAGLFNTDTAEKTGARISAAALQMFEANMDPAKEGSTSGYLPTTPIVGDGSIISPTSATTSASNDQDMKSPSVGNT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06431 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 51 281 IPR039605 GO:0003680
Vivi2g06431 300 MobiDBLite consensus disorder prediction 1 117 - -
Vivi2g06431 300 MobiDBLite consensus disorder prediction 261 300 - -
Vivi2g06431 300 MobiDBLite consensus disorder prediction 35 59 - -
Vivi2g06431 300 MobiDBLite consensus disorder prediction 60 74 - -
Vivi2g06431 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 179 IPR005175 -
Vivi2g06431 300 MobiDBLite consensus disorder prediction 256 300 - -
Vivi2g06431 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 236 - -
Vivi2g06431 300 MobiDBLite consensus disorder prediction 91 113 - -
Vivi2g06431 300 Gene3D - 120 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06431 Vivi-Chr2 200182256 200183537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06431 67 232 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 35.260 1.69e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06431 - - vvo:131641834 577.785