Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06425 ATGGAAGAGGATGACAAGAACGCGGCAGCAAAGATGATCGGTACTTCCACTGCTGATCATCAGAAAGAAGATGATGATGATATACTTCCGGAATCAACATTGGAGTCTTCACTCTTCAATCAAGTTCACATCAATGAAGAACCTTCTCAAACTGAAACTGCTGCTACTTCTTCCAAGAAAAGAAAACAAGTAGGTGGTGATGTAGCAATCAATAATTCTTCATCATTGCCATTGCCATTGCCATTGCCATTGGATTCTTCTCCCAACCTAACACCAAAGAAGAGAAAAGAGGGACCTTCTCTAACAACTTCTTCAGAAACTCCAGCCAAGAGGAGAAGAGGACGCCCTCCTGGTTCCATATCAAAGAAGAAAAAAGAAGGGCCTTCTCGAGCAACTTCAGAAACTCCAACCAAGAGGAGAAGAGGACGCCCCCCTGGTTCCAGATCAAAGAAGAAAAAAGAAGGACCTTCCCGAATAGCTTCTGCAGAAACAACAACCAAGAGAAGACGCGGCCGCCATTTTGGTACCGGTGGTGGTAAACTCGCCTCTCATATTATAGAGTTGAGTGCTGGCCAGGATGTGGTAGATGTTCTATACAAAATATCCGTGGAAAATCCTCATAAAACCGTTACCATACTCTCTGCGCTCGGTTCTGTATCAGACATTGTCGATCTTACTCCCAAGGGTCTGAAGCACTGCAAGGGAGAATTTGAGTTATATTTTATGGCTATAAAATGTATCGTTGAAGATGATGGTTGTCACTGTCGTGACAAGGCAACTTTTGTTGTTGGATGCAAAGATGATAAGGGAAATTTGTTTGTAAATACTTCTGTCAATTCCCTCATAGCGGCCGGCCGTGTTGAAATTACTGCGACCTTATTCAACACATACAACGCTAAGAAAAGAGGTGCAAGAATTTCGGCGTTTGCTGGTGCTACTGCTCAAAAATGA 951 0.4322 MEEDDKNAAAKMIGTSTADHQKEDDDDILPESTLESSLFNQVHINEEPSQTETAATSSKKRKQVGGDVAINNSSSLPLPLPLPLDSSPNLTPKKRKEGPSLTTSSETPAKRRRGRPPGSISKKKKEGPSRATSETPTKRRRGRPPGSRSKKKKEGPSRIASAETTTKRRRGRHFGTGGGKLASHIIELSAGQDVVDVLYKISVENPHKTVTILSALGSVSDIVDLTPKGLKHCKGEFELYFMAIKCIVEDDGCHCRDKATFVVGCKDDKGNLFVNTSVNSLIAAGRVEITATLFNTYNAKKRGARISAFAGATAQK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06425 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 300 IPR039605 GO:0003680
Vivi2g06425 316 Gene3D - 183 308 - -
Vivi2g06425 316 MobiDBLite consensus disorder prediction 120 141 - -
Vivi2g06425 316 MobiDBLite consensus disorder prediction 1 178 - -
Vivi2g06425 316 SUPERFAMILY AF0104/ALDC/Ptd012-like 181 297 - -
Vivi2g06425 316 MobiDBLite consensus disorder prediction 33 60 - -
Vivi2g06425 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 183 294 IPR005175 -
Vivi2g06425 316 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06425 Vivi-Chr2 200161031 200162238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06425 105 295 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 29.412 2.75e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06425 - - vvo:131651066 570.466