Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06367 ATGGCGGAAGAACACAGATTGCAAGCACCGCGTTTATGCGTCAACAATTGCGGATTCTTCGGCAGCGCCGCCACGGAGAATCTCTGTTCACGGTGCTATCGAGATTTACAGCGCAAGGAACAACAAGCTGAGTCAGCGAAACTCGTTCTCAATCAATCGATCTCGGTGCCGGCGGCGGCGGCGGTGTCTGAACCGTCGTCTTCGTCACCGGAGCTGGTTGATTTGCCTAGCGTTGTGGAAGAGGCAAAGGCGAAACCGTTGCAGCAGAATCGGTGCATGACGTGTAAGAAGCGCGTGGGGCTCACGGGGTTTAAGTGCAAGTGCGGGATGATGCTGTGTGGGACCCACCGTTACCCGGAGCAGCATGATTGTGAATTTGATTTCAAGGGGTTGGGAAGAGAGCAGATCGCGAAGGCGAACCCGGTGGTGAAGGGTGAGAAACTCGAGAAGATTTGA 456 0.5482 MAEEHRLQAPRLCVNNCGFFGSAATENLCSRCYRDLQRKEQQAESAKLVLNQSISVPAAAAVSEPSSSSPELVDLPSVVEEAKAKPLQQNRCMTCKKRVGLTGFKCKCGMMLCGTHRYPEQHDCEFDFKGLGREQIAKANPVVKGEKLEKI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06367 151 ProSiteProfiles Zinc finger AN1-type profile. 86 132 IPR000058 GO:0008270
Vivi2g06367 151 SMART AN1_Zf_4 92 129 IPR000058 GO:0008270
Vivi2g06367 151 Gene3D - 1 67 - -
Vivi2g06367 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 57 - -
Vivi2g06367 151 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 151 - -
Vivi2g06367 151 FunFam Zinc finger AN1-type containing 6 65 147 - -
Vivi2g06367 151 Gene3D - 68 147 IPR035896 -
Vivi2g06367 151 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Vivi2g06367 151 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Vivi2g06367 151 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Vivi2g06367 151 SUPERFAMILY AN1-like Zinc finger 75 146 IPR035896 -
Vivi2g06367 151 Pfam AN1-like Zinc finger 92 128 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06367 Vivi-Chr2 199100816 199101764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06367 1 151 C2H2 Transcription Factor Family AT3G52800 45.902 2.86e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06367 - - gmx:106795660 218.394