Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06362 ATGACATTGACCTTGTTCACTAACATGAACCACATTGACACACTTCTCAATGCACCCAACACCTATACAACACACAACCAAAAAAGATGGCACAATGCTTTCATCACAATCTATTGCTCTAGAGCTTTCAACAAACCTAAAATCACACCTATACCGACTTTCACTGTCCTTGATATCAACTCACCTCACTCTTTCACCATTGATCAACAAACTCTTATTCATCTTGTCAAAGACAAAAATATTGAAACCCTTCATGCACATGCTGGAGGACTTGAAGGTATTGCTTCATCTCTTCAAACCAACACTGAGTTTGGTATCAATCATGATTCTGAAGACATTGCAATCAGAAAACAAGTGTTTGGGTCCAACACATACAAAAAACCACCTTCAAAAAGTTTCATTCATTTTGTTCTTGAAGCATTTAAGGATGTCACAATTCTAATCCTTTTAGTTTGTGCTTCTCTTTCACTTGGCTTTGGTATCAAGGAACATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCATCCATAAGTAACTTCAAGCAAAACAAACAATTTGATAAATTGTCTCAAGTTAGCAATGATATTCAAATTGAGTTGGTTCGAAGTGGTCGCAGACAAAAGGTGTCAATCTTTGAGATTGTTGTAGGTGATATTGTTTGTTTGAAGATTGGAGATCAAGTACCCGCTGATGGATTGTTCGTAGATGGACATTCACTCAGAGTTGATGAATCCAGCATGACCGGTGAGAGCGATCATGTAGAGATTAGTAAACTCCATCATCCTTTTCTGTTTTCCGGAACAAAAGTTGCCGACGGATATGCGAAAATGATAGTTACATCGGTCGGTATGAACACAACATGGGGACAAATGATGAGTTCTATAAGCAATGACAATGATGAAGAAACACCTTTGCAGACAAGGTTGAATAAGCTAACATCATCCATTGGAAAGGGTGGTTTGGCTGTTGCGTTTTTAGTCCTTGTTGTATTGCTGGTTCGATATTTCACCGGGAACACAGAGACCGATAACGGAGTTCGAGAATTCAACGGAAGAAAGACTAGTTTTGATGAAGTGATGAATGCAGTGATTGGAATTATTTCTGATGCTGTTACTATTGTTGTTGTTGCTATCCCGGAGGGTTTGCCATTAGCTGTGACATTGACACTTGCTTATTCAATGAAAAAAATGATGGCTGATCAAGCTATGGTCAGAAAACTTTCTGCATGTGAGACTATGGGATCTGCTACTACTATTTGCACTGATAAAACAGGTACACTCACATTGAATCAGATGAAGGTGACAAAATTTTGGCTTGGTCTAGAACCATTGGAAGAGGGTGCATACTTAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTAATAATACAACTGGTGGTGTTCATGAATCTAAATCAGACTCTGATTCAAAATTTGAGTTTTCTGGTAGTCCAACAGAAAAGGCAATATTATCTTGGGCTGTTTTGGAATTGAATATGGAGATGGAAACTTTGACAAAAAGTTGTTCTATTATTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAAAAGAAATGTTGACAATAAAATGAATGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACTATGATGCTAATGGTATTGTGAAACATCTTGATAATGAAACTATGTCGAAGTTTGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTCGCATATGCTGAAGTTGAAGTTCAAGAGCTAGGAGATGAAGGAGAAAACAGCAAGATAGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTTGGTATTAAGGATCCGTGTCGTCCGGGGGTGAAGACAGCGGTGGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGGATTCTTCGAGCTAATCAAGACACAGATGAAACCGTGATTGAAGGGGAACAATTTCGCAACTTCACGCATGAAGAAAGGTTAGAGAAAGTTGAAAAAATATGTGTGATGGCAAGATCATCTCCATTTGACAAACTTCTAATGGTTCAATGCTTAAAAGAAAAAGGGCATGTAGTTGCTGTAACAGGAGATGGTACAAACGATGCACCGGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACAGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTTTGAATTGGGGAAGATGTGTTTACAACAACATCCAAAAATTCATTCAATTTCAGTTAACAGTGAATGTAGCTGCACTTGTTATCAATTTTGTAGCAGCAGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAATTATTATGGGTCAATTTGATTATGGATACATTAGGTGCTTTGGCTCTTGCAACTGAAAAACCTACTAAGGAATTAATGGATCAAAAGCCTGTTGGTAGAACAAAACCTCTTATTACCAACATTATGTGGAGGAATCTTCTGTCACAAGCTTTCTACCAAATAGTAATTTTGCTGACTCTTCAGTTTAAAGGGGAGGCTATTTTTGGAGTGACATCAAAGGTAAATGACACATTGATTTTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTCAATGCAAGGAAGTTGGAGAAGAAGAATGTTTTTGAAGGGATATTTAAAAGCAAATTGTTTATGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTAGTGATGGTTGAGTTTTTGAAGAAATTTGCTGATACAGAAAGGTTGAATTGGAGAGAATGGATTATCTGTATTGGTTTTGCTTCTGTTTCTTGGCCAATTGGTTTTGTGGTGAAATTGATACCTGTCTCTGATAAACCACTACTCGATTTTCTCAGTTTGAAGAAGAGATTATGA 3042 0.3708 MTLTLFTNMNHIDTLLNAPNTYTTHNQKRWHNAFITIYCSRAFNKPKITPIPTFTVLDINSPHSFTIDQQTLIHLVKDKNIETLHAHAGGLEGIASSLQTNTEFGINHDSEDIAIRKQVFGSNTYKKPPSKSFIHFVLEAFKDVTILILLVCASLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIELVRSGRRQKVSIFEIVVGDIVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEISKLHHPFLFSGTKVADGYAKMIVTSVGMNTTWGQMMSSISNDNDEETPLQTRLNKLTSSIGKGGLAVAFLVLVVLLVRYFTGNTETDNGVREFNGRKTSFDEVMNAVIGIISDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEEGAYLNVDPFVLQLIKEGVANNTTGGVHESKSDSDSKFEFSGSPTEKAILSWAVLELNMEMETLTKSCSIIQVETFNSKKKRSGVLLKRNVDNKMNAHWKGAAEMVLRMCSKYYDANGIVKHLDNETMSKFESIIQGMAASSLRCIAFAYAEVEVQELGDEGENSKIVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILRANQDTDETVIEGEQFRNFTHEERLEKVEKICVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDQKPVGRTKPLITNIMWRNLLSQAFYQIVILLTLQFKGEAIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFMGIVGVTLVLQVVMVEFLKKFADTERLNWREWIICIGFASVSWPIGFVVKLIPVSDKPLLDFLSLKKRL 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06362 1013 SFLD Haloacid Dehalogenase 414 794 - -
Vivi2g06362 1013 Pfam haloacid dehalogenase-like hydrolase 429 755 - -
Vivi2g06362 1013 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 998 IPR023298 -
Vivi2g06362 1013 Gene3D - 139 994 - -
Vivi2g06362 1013 Pfam E1-E2 ATPase 209 410 - -
Vivi2g06362 1013 FunFam Calcium-transporting ATPase 180 308 - -
Vivi2g06362 1013 SFLD p-type atpase 414 794 IPR044492 -
Vivi2g06362 1013 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 639 IPR023299 GO:0000166
Vivi2g06362 1013 SUPERFAMILY Calcium ATPase, transduction domain A 209 306 IPR008250 -
Vivi2g06362 1013 CDD P-type_ATPase_Ca_PMCA-like 116 874 - -
Vivi2g06362 1013 Gene3D - 110 308 - -
Vivi2g06362 1013 FunFam Calcium-transporting ATPase 758 1000 - -
Vivi2g06362 1013 PRINTS H+-transporting ATPase (proton pump) signature 588 606 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06362 1013 PRINTS H+-transporting ATPase (proton pump) signature 773 798 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06362 1013 PRINTS H+-transporting ATPase (proton pump) signature 741 757 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06362 1013 NCBIfam calcium-translocating P-type ATPase, PMCA-type 74 998 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vivi2g06362 1013 NCBIfam HAD-IC family P-type ATPase 713 822 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06362 1013 NCBIfam HAD-IC family P-type ATPase 375 452 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06362 1013 Gene3D - 429 786 IPR023214 -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 635 646 - -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 765 777 - -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 255 269 - -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 741 760 - -
Vivi2g06362 1013 PRINTS P-type cation-transporting ATPase superfamily signature 657 667 - -
Vivi2g06362 1013 SUPERFAMILY HAD-like 430 846 IPR036412 -
Vivi2g06362 1013 FunFam Calcium-transporting ATPase 636 786 - -
Vivi2g06362 1013 Pfam Cation transporter/ATPase, N-terminus 87 156 IPR004014 -
Vivi2g06362 1013 SMART Cation_ATPase_N_a_2 85 161 IPR004014 -
Vivi2g06362 1013 Pfam Cation transporting ATPase, C-terminus 826 996 IPR006068 -
Vivi2g06362 1013 Gene3D - 442 642 IPR023299 GO:0000166
Vivi2g06362 1013 PANTHER CATION TRANSPORTING ATPASE 55 999 - -
Vivi2g06362 1013 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Vivi2g06362 1013 FunFam Calcium-transporting ATPase 442 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06362 Vivi-Chr2 198925813 198929315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06362 12 1012 Primary Pumps ATPases AT3G22910 67.126 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06362 K01537 - gmx:100793918 1597.02