Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06359 ATGTTTATATATTCAGAATCTTCAGAAGCATCCATGGCTCTACAAGAAATAGATCAAGAGGTTTCAATGCAAGAAGAACAAGTAGAAACTCCAATTCCTCAACTAAGCAGACAAAACTCAATACTCTCACTCACCCTTGACGAGTTCCAATGCAAGAGTGGAAAGAGCTTTGGTTCTCTCAACATGGAAGAATTCCTAGCCAGCATTTGCAATTCCAGTGATGAAGCTACTGCATCTCACAACAATACTAAAAGTGTTGCAACAGAAGAAGAACACAACATTTCACAACATGATAACTCATTTTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATTCATAAAAACCAACCACAGTTCAAAGAAGAAAATAGCCTTAAGAAAAACGAGTCACGCAAGAAGCAACAAACACTTGGAGAAATGACTTTGGAGGATTTCTTTGTGAAAGCTGGTGTAGTGCAGCAACAATCATCATCATTGTCCTTTCAGAATCATAGTGGCAGTGTTTCAAGTAATACGAGACCATTGAATGTCGCAAGTTATGGTTTGAGGCCTTCAATTGGAATGGGATATTCTAGCAATGGTCTTGTACCATACCAAATGATGTCACAGAATAACAACTCAGGAGTGCCGGACCGCGCAATTGGGAAAAGTCAAAACTTGCCTGAATCAAGTGGATGTAGTAACAATAGCAAGATGATAATTGATGGTCCTTCCGAAGTTGTCGTGGAGCGAAGGCAACGTAGGATGTTGAAAAATCGAGAATCGGCTGCTCGTTCTCGAGCAAGAAGACAGGCATACACTGTGGAGCTAGAGGCAGAGCTGAATCACCTAAAAGAAGAGAATGAAAAGCTAAAACAAATTCTGGCTGAAGCAGAGAGCAAGAGGAGACAAGAGCTTTTACAGAGAACAAATTCACCAAAGGTTCGAAAGGGAACAGAAAAATTAAGAGGAATAAGAAGGCCTATAAGTGCAACCTGGTGA 1002 0.4062 MFIYSESSEASMALQEIDQEVSMQEEQVETPIPQLSRQNSILSLTLDEFQCKSGKSFGSLNMEEFLASICNSSDEATASHNNTKSVATEEEHNISQHDNSFSVPPPICKKTVDEVWSEIHKNQPQFKEENSLKKNESRKKQQTLGEMTLEDFFVKAGVVQQQSSSLSFQNHSGSVSSNTRPLNVASYGLRPSIGMGYSSNGLVPYQMMSQNNNSGVPDRAIGKSQNLPESSGCSNNSKMIIDGPSEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNHLKEENEKLKQILAEAESKRRQELLQRTNSPKVRKGTEKLRGIRRPISATW 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06359 333 SUPERFAMILY Leucine zipper domain 251 298 IPR046347 GO:0003700|GO:0006355
Vivi2g06359 333 SMART brlzneu 247 312 IPR004827 GO:0003700|GO:0006355
Vivi2g06359 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Vivi2g06359 333 MobiDBLite consensus disorder prediction 302 321 - -
Vivi2g06359 333 Pfam bZIP transcription factor 251 303 IPR004827 GO:0003700|GO:0006355
Vivi2g06359 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 301 IPR004827 GO:0003700|GO:0006355
Vivi2g06359 333 FunFam BZIP transcription factor 249 300 - -
Vivi2g06359 333 Coils Coil 274 308 - -
Vivi2g06359 333 Gene3D - 249 305 - -
Vivi2g06359 333 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 310 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06359 Vivi-Chr2 198906614 198908820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06359 35 333 bZIP Transcription Factor Family AT3G44460 44.648 3.62e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g06359 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06359 K14432 - gmx:100820370 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06359 2 198906614 198908820 Vivi2g06359 2 198906614 198908820 ECH