Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06358 ATGGCTCTACAAGAAATAGATCAAGAGGTTTCAATGCAAGAAGAACAAGTAGAAACTCCAATTCCTCAACTAAGCAGACAAAACTCAATACTCTCACTCACCCTTGACGAGTTCCAATGCAAGAGTGGAAAGAGCTTTGGTTCTCTCAACATGGAAGAATTCCTAGCCAGCATTTGCAATTCCAGTGATGAAGCTACTGCATCTCACAACAATACTAAAAGTGTTGCAACAGAAGAAGAACACAACATTTCACAACATGATAACTCATTTTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATTCATAAAAACCAACCACAGTTCAAAGAAGAAAATAGCCTTAAGAAAAACGAGTCACGCAAGAAGCAACAAACACTTGGAGAAATGACTTTGGAGGATTTCTTTGTGAAAGCTGGTGTAGTGCAGCAACAATCATCATCATTGTCCTTTCAGAATCATAGTGGCAGTGTTTCAAGTAATACGAGACCATTGAATGTCGCAAGTTATGGTTTGAGGCCTTCAATTGGAATGGGATATTCTAGCAATGGTCTTGTACCATACCAAATGATGTCACAGAATAACAACTCAGGAGTGCCGGACCGCGCAATTGGGAAAAGTCAAAACTTGCCTGAATCAAGTGGATGTAGTAACAATAGCAAGATGATAATTGATGGTCCTTCCGAAGTTGTCGTGGAGCGAAGGCAACGTAGGATGTTGAAAAATCGAGAATCGGCTGCTCGTTCTCGAGCAAGAAGACAGGCATACACTGTGGAGCTAGAGGCAGAGCTGAATCACCTAAAAGAAGAGAATGAAAAGCTAAAACAAATTCTGGCTGAAGCAGAGAGCAAGAGGAGACAAGAGCTTTTACAGAGAACAAATTCACCAAAGGTTCGAAAGGGAACAGAAAAATTAAGAGGAATAAGAAGGCCTATAAGTGCAACCTGGTGA 969 0.4097 MALQEIDQEVSMQEEQVETPIPQLSRQNSILSLTLDEFQCKSGKSFGSLNMEEFLASICNSSDEATASHNNTKSVATEEEHNISQHDNSFSVPPPICKKTVDEVWSEIHKNQPQFKEENSLKKNESRKKQQTLGEMTLEDFFVKAGVVQQQSSSLSFQNHSGSVSSNTRPLNVASYGLRPSIGMGYSSNGLVPYQMMSQNNNSGVPDRAIGKSQNLPESSGCSNNSKMIIDGPSEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNHLKEENEKLKQILAEAESKRRQELLQRTNSPKVRKGTEKLRGIRRPISATW 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06358 322 Coils Coil 263 297 - -
Vivi2g06358 322 SMART brlzneu 236 301 IPR004827 GO:0003700|GO:0006355
Vivi2g06358 322 MobiDBLite consensus disorder prediction 1 20 - -
Vivi2g06358 322 MobiDBLite consensus disorder prediction 290 310 - -
Vivi2g06358 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 299 IPR043452 GO:0003700|GO:0045893
Vivi2g06358 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Vivi2g06358 322 FunFam BZIP transcription factor 238 289 - -
Vivi2g06358 322 Pfam bZIP transcription factor 240 292 IPR004827 GO:0003700|GO:0006355
Vivi2g06358 322 Gene3D - 238 294 - -
Vivi2g06358 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 290 IPR004827 GO:0003700|GO:0006355
Vivi2g06358 322 SUPERFAMILY Leucine zipper domain 240 287 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06358 Vivi-Chr2 198906613 198908467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06358 24 322 bZIP Transcription Factor Family AT3G44460 44.648 3.06e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g06358 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06358 K14432 - gmx:100820370 305.064