Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06356 ATGACTTTGACCTTGTTCACTAACATGAACCATATTGACACGCTTCTCAATGCACCAAAAACCAAACACAACAAAAGATGGCATAATGCTTTCATCACAATCTATTGTTCTAGAGCTTTCAACTCACATTTTACCAACAAACCTAAAATCACACCCATCCCATCTTTCACTGTCCTTGATATCAACTCACCTCACTCTTTCACCATTGATCAACAAACTCTTATTCATCTTGTCAAAGACAAAAACATTGAAACCCTTCATACACATGCTGGAGGACTTGAAGGTATTGCTTCATCTCTTCAAACCAACACTCAGTTTGGTATCAATCATGACTCTGAACACATTGCAATTAGAAAACAAGTGTTTGGTTCCAACACATACAATAAACCACCTTCTAAAAGTTTCATTCATTTTGTTCTTGAAGCATTTAAGGATGTCACAATTCTAATCCTTTTGGTTTGTGCTTCTCTTTCACTTGGCTTTGGCATCAAGGAACATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCATCCATAAGTAACTTCAAACAAAACAAACAATTTGATAAATTGTCTCAAGTTAGCAATGATATTCAAATTGATTTGGTTCGAAGTGGTCGCAGACAAAAGGTGTCAATCTTTGAGATTGTTGTTGGTGATATTGTTTGTTTGAAGATTGGTGATCAAGTACCTGCCGATGGATTGTTCGTAGATGGACATTCACTCAGAGTTGATGAATCCAGCATGACAGGTGAGAGCGATCATGTAGAGATTAGTAAACACCATCATCCTTTTTTGTTTTCCGGAACAAAAGTTGCTGACGGATATGCGAAAATGCTAGTTACATCGGTCGGTATGAACACAACATGGGGACAAATGATGAGTTCTATAAGCAATGACAATGATGAAGAAACACCTTTGCAGACAAGGTTGAATAAGCTAACATCATCCATCGGAAAGGGTGGTTTGGCCGTGGCGTTTTTAGTTCTTGTTGTATTGCTCATTCGATATTTCACCGGGAATACAGAGACTGATAACGGAGTTCGAGAATTCAACGGAAGAAAGACTAGTTTTGATGAAGTGATGAATGCAGTGATTGGTATTATTTCGGATGCTGTTACTATTGTTGTTGTTGCTATCCCGGAGGGTTTGCCATTAGCTGTGACATTGACTCTTGCTTACTCAATGAAGAAAATGATGGCTGATCAAGCTATGGTCAGAAAACTTTCTGCATGTGAGACTATGGGATCTGCTACTACTATTTGCACTGATAAAACAGGCACACTCACTTTGAATCAGATGAAGGTGACAAAATTTTGGCTTGGTCTAGAACCATTGGAAGAGGGTGCATATTTAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTAATAATACAACTGGTGCTGTTCATGAATCTAAATCAGACTCTGATTCAAAATTTGAGTTTTCTGGTAGTCCAACAGAAAAGGCAATATTATCTTGGGCTGTTTTGGAATTGAATGTGGAAATGGAAACTTTGACAAAAAGTTGTTCTATTATTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAAAAGAAATATTGACAACAAAGTGAATGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACTATGATGCTAATGGTATTGTGAAAAATCTTGATGATGAAACCATGTCGAAATTTGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTCGCATATGCTGAAGTTGAAGTTCAAGAGCTAGGCGATGAAGGAGAAAACAGCAAGATAGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTTGGTATTAAGGATCCGTGTCGTCCGGGGGTGAAGACAGCGGTGGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGAATTCTTCGAGTTAATCAAGACACAGATGAAACCGTGATTGAAGGCGAACAATTTCGCAACTTCACGCACGAAGAAAGGTTAGAGAAAGTTGAAAAAATCAGTATGATGGCAAGATCATCTCCATTTGACAAACTTCTAATGGTTCAATGCTTAAAAGAAAAAGGGCATGTAGTTGCTGTAACAGGAGATGGTACAAACGATGCACCGGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACAGAAGTTGCAAACGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTTTGAATTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAGTTAACAGTGAATGTGGCTGCACTTGTTATCAATTTTGTAGCAGCAGTATCAGCAGGTGAAGTTCCATTAACAGCAGTTCAGTTATTATGGGTCAATTTGATTATGGATACATTAGGTGCTTTGGCTCTTGCAACTGAAAAACCTACTAAGGAATTAATGGATCAAAAACCTGTTGGTAGAACAAAACCTCTTATTACCAACATTATGTGGAGGAATCTTCTGTCACAAGCTTTCTACCAAATAGTAATTTTGCTGACTCTTCAGTTCAAAGGGGAGGCTATTTTTGGTGTGACATCAAAGGTGAATGACACATTGATTTTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTCAATGCAAGGAAGTTGGAGAAGAAGAATGTTTTTGAAGGGATATTTAAAAGCAAACTGTTTATCGGAATAGTTGGTGTGACATTGGTGCTTCAAGTAGTGATGGTTGAGTTTTTGAAGAAATTTGCTGATACAGAAAGGTTGAATTGGAGAGAATGGATTATTTGTATTGGTCTTGCTTCTGCTTCTTGGCCAATTGGTTTTGTTGTGAAGTTGATACCGGTTTCAGATAAACCATTACTTGATTTTCTGAGTTTGAGGAAGAGACTATATGAAGATTATTAG 3060 0.3706 MTLTLFTNMNHIDTLLNAPKTKHNKRWHNAFITIYCSRAFNSHFTNKPKITPIPSFTVLDINSPHSFTIDQQTLIHLVKDKNIETLHTHAGGLEGIASSLQTNTQFGINHDSEHIAIRKQVFGSNTYNKPPSKSFIHFVLEAFKDVTILILLVCASLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFEIVVGDIVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEISKHHHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISNDNDEETPLQTRLNKLTSSIGKGGLAVAFLVLVVLLIRYFTGNTETDNGVREFNGRKTSFDEVMNAVIGIISDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEEGAYLNVDPFVLQLIKEGVANNTTGAVHESKSDSDSKFEFSGSPTEKAILSWAVLELNVEMETLTKSCSIIQVETFNSKKKRSGVLLKRNIDNKVNAHWKGAAEMVLRMCSKYYDANGIVKNLDDETMSKFESIIQGMAASSLRCIAFAYAEVEVQELGDEGENSKIVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILRVNQDTDETVIEGEQFRNFTHEERLEKVEKISMMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVANESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDQKPVGRTKPLITNIMWRNLLSQAFYQIVILLTLQFKGEAIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFIGIVGVTLVLQVVMVEFLKKFADTERLNWREWIICIGLASASWPIGFVVKLIPVSDKPLLDFLSLRKRLYEDY 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06356 1019 SFLD p-type atpase 416 796 IPR044492 -
Vivi2g06356 1019 Gene3D - 112 310 - -
Vivi2g06356 1019 Pfam haloacid dehalogenase-like hydrolase 431 757 - -
Vivi2g06356 1019 FunFam Calcium-transporting ATPase 760 1002 - -
Vivi2g06356 1019 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 441 641 IPR023299 GO:0000166
Vivi2g06356 1019 Gene3D - 444 644 IPR023299 GO:0000166
Vivi2g06356 1019 Pfam Cation transporting ATPase, C-terminus 828 998 IPR006068 -
Vivi2g06356 1019 SMART Cation_ATPase_N_a_2 87 163 IPR004014 -
Vivi2g06356 1019 FunFam Calcium-transporting ATPase 638 788 - -
Vivi2g06356 1019 CDD P-type_ATPase_Ca_PMCA-like 118 876 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 743 762 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 659 669 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 637 648 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Vivi2g06356 1019 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Vivi2g06356 1019 FunFam Calcium-transporting ATPase 182 310 - -
Vivi2g06356 1019 Gene3D - 431 788 IPR023214 -
Vivi2g06356 1019 Pfam Cation transporter/ATPase, N-terminus 89 158 IPR004014 -
Vivi2g06356 1019 FunFam Calcium-transporting ATPase 444 644 - -
Vivi2g06356 1019 Gene3D - 141 991 - -
Vivi2g06356 1019 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Vivi2g06356 1019 NCBIfam HAD-IC family P-type ATPase 377 454 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06356 1019 NCBIfam HAD-IC family P-type ATPase 714 824 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06356 1019 SUPERFAMILY HAD-like 432 848 IPR036412 -
Vivi2g06356 1019 PRINTS H+-transporting ATPase (proton pump) signature 590 608 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06356 1019 PRINTS H+-transporting ATPase (proton pump) signature 775 800 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06356 1019 PRINTS H+-transporting ATPase (proton pump) signature 743 759 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g06356 1019 PANTHER CATION TRANSPORTING ATPASE 51 1001 - -
Vivi2g06356 1019 SUPERFAMILY Calcium ATPase, transduction domain A 212 308 IPR008250 -
Vivi2g06356 1019 NCBIfam calcium-translocating P-type ATPase, PMCA-type 76 1000 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vivi2g06356 1019 SFLD Haloacid Dehalogenase 416 796 - -
Vivi2g06356 1019 Pfam E1-E2 ATPase 211 412 - -
Vivi2g06356 1019 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 1000 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06356 Vivi-Chr2 198865962 198869375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06356 12 1014 Primary Pumps ATPases AT3G22910 67.520 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06356 K01537 - gmx:100793918 1593.56