Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06346 ATGGCACCGAAGAAGGAGAAGGCACCACCACCGTCGTCAAAGCCGGCGAAATCCGGAGGAGGAAAACAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAAAAGGTCAACAACATGGTCTTGTTTGACCAAGGTACCTACGATAAGCTTCTCACTGAAGCTCCTAAGTATAAACTCATTACTCCATCGGTTCTTTCTGATCGTCTCAGGATTAATGGATCTTTGGCACGTCGTGCAATCAAAGATTTGATGGCAAGAGGTTTGATTAGGTTGGTTTCTGCTCATGCTAGCCAACAGATTTACACCAGAGCAACTAATACATAA 327 0.4434 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIKDLMARGLIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06346 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Vivi2g06346 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Vivi2g06346 108 MobiDBLite consensus disorder prediction 1 36 - -
Vivi2g06346 108 Gene3D - 21 108 - -
Vivi2g06346 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06346 Vivi-Chr2 198668133 198668937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06346 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.037 1.51e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06346 K02975 - mof:131149219 158.303