Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06345 ATGGCTAGCGCAAGTGTAGGTGTTGGTGTTGGTGATGAAGCTCAACATAACAACAATAAACTCACTCTATATTCATATTGGAGAAGTTCATGTTCCTTCCGTGTCCGAATTGCTCTCAACCTCAAAGGACTCAAATTTGACTACAAACCAGTTAATCTTTTGAAGGGAGAACAATCTCATCCTGAATTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCCATTCTTGTTGATGGCTCTGCTGTAATTTTTGACTCCTTTGCAATTATCATGTATTTGGAAGATAAGTATCCTCAACATCCTTTACTCCCTACCGATATCCATAAAAGAGCAATCAATTTCCAGGTTGTGAGTATTGTTTCTTCATTAATACAACCTCTTCAAAACCTAGATACTCTGAAGTACATCGATAAAAGAGTTAGCCGGGATGATAAACTTCCATGGGTCCAGAGTATAATAAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGATGAAGTTTTCATGGCGGATATATTTTTAGCACCTCAGTTACATGCTGCATCCAAGAGATTCAACATTGACATGAGTGAGTTTCCTATTCTTTCAAGACTACATGAGACATATTATGATATGCCAGCTTTCCGAGAGACTTTGCCGGAGAATCAGCCAGATGCAGTAGGCCAGCTGAGTCAATGA 705 0.3972 MASASVGVGVGDEAQHNNNKLTLYSYWRSSCSFRVRIALNLKGLKFDYKPVNLLKGEQSHPEFLQLNPVGFVPILVDGSAVIFDSFAIIMYLEDKYPQHPLLPTDIHKRAINFQVVSIVSSLIQPLQNLDTLKYIDKRVSRDDKLPWVQSIIRKGFTALEKLLKEHTGRYATGDEVFMADIFLAPQLHAASKRFNIDMSEFPILSRLHETYYDMPAFRETLPENQPDAVGQLSQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06345 234 Pfam Glutathione S-transferase, N-terminal domain 20 93 IPR004045 -
Vivi2g06345 234 Pfam Glutathione S-transferase, C-terminal domain 148 204 - -
Vivi2g06345 234 SFLD Glutathione Transferase (cytosolic) 21 209 IPR040079 -
Vivi2g06345 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 230 IPR010987 -
Vivi2g06345 234 SUPERFAMILY Thioredoxin-like 16 103 IPR036249 -
Vivi2g06345 234 CDD GST_N_Zeta 21 93 IPR034333 -
Vivi2g06345 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Vivi2g06345 234 PANTHER MALEYLACETOACETATE ISOMERASE 21 228 - -
Vivi2g06345 234 SUPERFAMILY GST C-terminal domain-like 100 227 IPR036282 -
Vivi2g06345 234 Gene3D Glutaredoxin 18 103 - -
Vivi2g06345 234 SFLD Main (cytGST) 21 209 - -
Vivi2g06345 234 NCBIfam maleylacetoacetate isomerase 22 228 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vivi2g06345 234 CDD GST_C_Zeta 107 225 IPR034330 -
Vivi2g06345 234 FunFam Glutathione S-transferase Z1 19 103 - -
Vivi2g06345 234 Gene3D - 104 230 - -
Vivi2g06345 234 FunFam Maleylacetoacetate isomerase 104 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06345 Vivi-Chr2 198646432 198649906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06345 20 227 Glutathione S-transferase Gene Family AT2G02380 60.577 2.32e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06345 K01800 - gmx:547590 347.051