Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06335 ATGAAGAAGTTAATGTGGATGAGGTTAGTGACAATTTTTCTAATTTTATTTGGCAGAGTATCCAATACTGCAACTGTAGCATATGCCAATGCAGTATATCCTGCAGTGTTTGCATTTGGTGATTCAATCTTTGATACTGGAAATAATAACAATCTTGCAACTGCTTCTAAGTGTAACTTTCCTCCCTATGGAAGGGATTTCTATGGAGGAGCTGCTACCGGAAGATTCGGTAACGGCAAAGTTCTATCAGATGTGATAACGGCGGCTCTAGGAGTGAAAGACACGTTACCGGCATACCTAGACCCACAATTAACTGCTCAAGATCTTCCTAGTGGAGTGTGCTTTGCATCAGGCGGTTCAGGGTTAGACGATTTGACTGCAAACTCCCAGGGAGGAGTTTTAACAATGGGAGCTCAACTGGACCTGTTCAAACAATGCATAGAAAAACTGAGAGCAGCTGTTGGAACAGAAAAAGCAGCCGAAATCATATCAAACGCTTTGTTTATAATATCGGCCGGAAACAATGATGTTGCATTTGCTTATTCTTATACCATTAGGAGAGCTTTGCTTTTCAATGTATATGCCGATATGTTAGTTGATTCAAGTCAAAATTTCCTCAAGAGTCTATATCAACTTGGAGCACGACATGTATGGGTTCTAAGTACAATACCATTGGGGTGTTTACCTTCAGCTAGGTCTATATTTGGAGGACCAATAAGTGCATGCCTAGATTTTGAGAATCTTTTGGCACAAACATTCAATGGCATGTTATCGACCGGGGTTTCAAATCTCAAGGCCTCTCTTCCAGATTATGATGTTAAGTTTGTTGATGTTTATAGTCCTATGCTTAATATCATAATGAATCCTTCCGCGTCAGGGTTCGAAAATGTGGTGAATGGGTGTTGTGGAACTGGAACATTTGAAATGGGAGCATCATGCAACATGTTTACTTACCAATGTCCAAGTACTGCAGCTTACTTTTTCTGGGATGCTGCTCATCCTTCAGAGAGAGCTTATCAACTAACTGTTGCTCAACTACTACATGCTCAAAACTATGATCTCACTAGTCACCATGTTGTCAAAGCTCTTCATACTTTGAATGTGTCAAATATTGATTATAATAGCTAA 1128 0.3989 MKKLMWMRLVTIFLILFGRVSNTATVAYANAVYPAVFAFGDSIFDTGNNNNLATASKCNFPPYGRDFYGGAATGRFGNGKVLSDVITAALGVKDTLPAYLDPQLTAQDLPSGVCFASGGSGLDDLTANSQGGVLTMGAQLDLFKQCIEKLRAAVGTEKAAEIISNALFIISAGNNDVAFAYSYTIRRALLFNVYADMLVDSSQNFLKSLYQLGARHVWVLSTIPLGCLPSARSIFGGPISACLDFENLLAQTFNGMLSTGVSNLKASLPDYDVKFVDVYSPMLNIIMNPSASGFENVVNGCCGTGTFEMGASCNMFTYQCPSTAAYFFWDAAHPSERAYQLTVAQLLHAQNYDLTSHHVVKALHTLNVSNIDYNS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06335 375 CDD SGNH_plant_lipase_like 34 349 IPR035669 -
Vivi2g06335 375 PANTHER GDSL ESTERASE/LIPASE EXL3 17 345 - -
Vivi2g06335 375 SUPERFAMILY SGNH hydrolase 37 347 - -
Vivi2g06335 375 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Vivi2g06335 375 Gene3D SGNH hydrolase 22 352 IPR036514 -
Vivi2g06335 375 Pfam GDSL-like Lipase/Acylhydrolase 36 342 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06335 Vivi-Chr2 198554836 198556407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06335 10 348 Pollen Coat Proteome AT1G75910 40.698 2.96e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06335 - - vvo:131596689 566.229